RNA–Protein interactions for RNA: ENST00000484893.1

GINS1-204, Transcript of GINS complex subunit 1, humanhuman

TSL 5

Gene GINS1, Length 583 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-204ENST00000484893 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
GINS1-204ENST00000484893 RRP1P56182 461 aaKnown RBP16.43■□□□□ 0.22
GINS1-204ENST00000484893 CTSWP56202 376 aa16.43■□□□□ 0.22
GINS1-204ENST00000484893 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
GINS1-204ENST00000484893 C9orf78Q9NZ63 289 aaPredicted RBP16.43■□□□□ 0.22
GINS1-204ENST00000484893 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
GINS1-204ENST00000484893 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
GINS1-204ENST00000484893 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
GINS1-204ENST00000484893 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
GINS1-204ENST00000484893 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
GINS1-204ENST00000484893 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
GINS1-204ENST00000484893 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
GINS1-204ENST00000484893 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
GINS1-204ENST00000484893 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
GINS1-204ENST00000484893 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
GINS1-204ENST00000484893 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
GINS1-204ENST00000484893 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
GINS1-204ENST00000484893 GREM2Q9H772 168 aa16.4■□□□□ 0.22
GINS1-204ENST00000484893 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
GINS1-204ENST00000484893 MVPQ14764 893 aaKnown RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
GINS1-204ENST00000484893 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
GINS1-204ENST00000484893 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
GINS1-204ENST00000484893 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
GINS1-204ENST00000484893 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
GINS1-204ENST00000484893 MS4A1P11836 297 aa16.38■□□□□ 0.21
GINS1-204ENST00000484893 HSP90B1P14625 803 aaKnown RBP16.38■□□□□ 0.21
GINS1-204ENST00000484893 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
GINS1-204ENST00000484893 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
GINS1-204ENST00000484893 DALRD3Q5D0E6 543 aaKnown RBP16.38■□□□□ 0.21
GINS1-204ENST00000484893 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
GINS1-204ENST00000484893 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
GINS1-204ENST00000484893 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
GINS1-204ENST00000484893 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
GINS1-204ENST00000484893 SPEF2Q9C093 1822 aa16.38■□□□□ 0.21
GINS1-204ENST00000484893 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
GINS1-204ENST00000484893 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
GINS1-204ENST00000484893 ALDH1B1P30837 517 aa16.37■□□□□ 0.21
GINS1-204ENST00000484893 GRAPQ13588 217 aa16.37■□□□□ 0.21
GINS1-204ENST00000484893 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
GINS1-204ENST00000484893 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
GINS1-204ENST00000484893 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
GINS1-204ENST00000484893 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
GINS1-204ENST00000484893 GNAI3P08754 354 aa16.36■□□□□ 0.21
GINS1-204ENST00000484893 RFX5P48382 616 aaPredicted RBP16.36■□□□□ 0.21
GINS1-204ENST00000484893 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
GINS1-204ENST00000484893 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
GINS1-204ENST00000484893 BBOX1O75936 387 aa16.35■□□□□ 0.21
GINS1-204ENST00000484893 ITGA6P23229 1130 aa16.35■□□□□ 0.21
GINS1-204ENST00000484893 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
GINS1-204ENST00000484893 MTX1Q13505 466 aa16.35■□□□□ 0.21
GINS1-204ENST00000484893 SBF1O95248 1867 aa16.35■□□□□ 0.21
GINS1-204ENST00000484893 C21orf2O43822 256 aa16.34■□□□□ 0.21
GINS1-204ENST00000484893 PRELPP51888 382 aa16.34■□□□□ 0.21
GINS1-204ENST00000484893 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
GINS1-204ENST00000484893 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
GINS1-204ENST00000484893 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
GINS1-204ENST00000484893 SP8Q8IXZ3 490 aa16.33■□□□□ 0.2
GINS1-204ENST00000484893 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
GINS1-204ENST00000484893 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
GINS1-204ENST00000484893 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
GINS1-204ENST00000484893 NFKBIEO00221 500 aa16.32■□□□□ 0.2
GINS1-204ENST00000484893 GNAI2P04899 355 aa16.32■□□□□ 0.2
GINS1-204ENST00000484893 UTRNP46939 3433 aa16.32■□□□□ 0.2
GINS1-204ENST00000484893 GPR162Q16538 588 aa16.32■□□□□ 0.2
GINS1-204ENST00000484893 DUOX1Q9NRD9 1551 aa16.32■□□□□ 0.2
GINS1-204ENST00000484893 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
GINS1-204ENST00000484893 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
GINS1-204ENST00000484893 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
GINS1-204ENST00000484893 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
GINS1-204ENST00000484893 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
GINS1-204ENST00000484893 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
GINS1-204ENST00000484893 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
GINS1-204ENST00000484893 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
GINS1-204ENST00000484893 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
GINS1-204ENST00000484893 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
GINS1-204ENST00000484893 ATP8B2P98198 1209 aa16.3■□□□□ 0.2
GINS1-204ENST00000484893 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
GINS1-204ENST00000484893 POLA2Q14181 598 aa16.3■□□□□ 0.2
GINS1-204ENST00000484893 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
GINS1-204ENST00000484893 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
GINS1-204ENST00000484893 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
GINS1-204ENST00000484893 PUS3Q9BZE2 481 aaKnown RBP16.3■□□□□ 0.2
GINS1-204ENST00000484893 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
GINS1-204ENST00000484893 TMC4Q7Z404 712 aa16.29■□□□□ 0.2
GINS1-204ENST00000484893 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
GINS1-204ENST00000484893 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
GINS1-204ENST00000484893 GPSM2P81274 684 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
GINS1-204ENST00000484893 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
GINS1-204ENST00000484893 COL4A5P29400 1685 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms