RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 PTK7Q13308 1070 aa8.85□□□□□ -0.99
RC3H1-205ENST00000484867 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
RC3H1-205ENST00000484867 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
RC3H1-205ENST00000484867 FNBP4Q8N3X1 1017 aaPredicted RBP8.85□□□□□ -0.99
RC3H1-205ENST00000484867 KLK14Q9P0G3 267 aa8.85□□□□□ -0.99
RC3H1-205ENST00000484867 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
RC3H1-205ENST00000484867 TARSP26639 723 aaKnown RBP8.84□□□□□ -0.99
RC3H1-205ENST00000484867 CRTC2Q53ET0 693 aaPredicted RBP8.84□□□□□ -0.99
RC3H1-205ENST00000484867 KRTAP9-9Q9BYP9 154 aa8.84□□□□□ -0.99
RC3H1-205ENST00000484867 KRTAP9-4Q9BYQ2 154 aa8.84□□□□□ -0.99
RC3H1-205ENST00000484867 WFDC8Q8IUA0 241 aa8.83□□□□□ -1
RC3H1-205ENST00000484867 DZIP1LQ8IYY4 767 aaKnown RBP8.83□□□□□ -1
RC3H1-205ENST00000484867 QTRT2Q9H974 415 aaKnown RBP8.83□□□□□ -1
RC3H1-205ENST00000484867 LGR5O75473 907 aa8.82□□□□□ -1
RC3H1-205ENST00000484867 EPB42P16452 691 aa8.82□□□□□ -1
RC3H1-205ENST00000484867 DPYDQ12882 1025 aa8.82□□□□□ -1
RC3H1-205ENST00000484867 PRR23CQ6ZRP0 262 aa8.82□□□□□ -1
RC3H1-205ENST00000484867 OPLAHO14841 1288 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 EGFRP00533 1210 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 WEE1P30291 646 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 ARSDP51689 593 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 NRLP54845 237 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 ELMSAN1Q6PJG2 1045 aa8.81□□□□□ -1
RC3H1-205ENST00000484867 SASH3O75995 380 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 MICAL2O94851 1124 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
RC3H1-205ENST00000484867 DGKZQ13574 1117 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 KRT25Q7Z3Z0 450 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 GLMNQ92990 594 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 MYO19Q96H55 970 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 HINFPQ9BQA5 517 aa8.8□□□□□ -1
RC3H1-205ENST00000484867 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
RC3H1-205ENST00000484867 SLC51AQ86UW1 340 aa8.79□□□□□ -1
RC3H1-205ENST00000484867 TMEM130Q8N3G9 435 aa8.79□□□□□ -1
RC3H1-205ENST00000484867 ARXQ96QS3 562 aa8.79□□□□□ -1
RC3H1-205ENST00000484867 SMG9Q9H0W8 520 aaKnown RBP8.79□□□□□ -1
RC3H1-205ENST00000484867 TLR7Q9NYK1 1049 aaKnown RBP8.79□□□□□ -1
RC3H1-205ENST00000484867 RARAP10276 462 aa8.78□□□□□ -1
RC3H1-205ENST00000484867 Q6ZS46 218 aa8.78□□□□□ -1
RC3H1-205ENST00000484867 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
RC3H1-205ENST00000484867 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
RC3H1-205ENST00000484867 HOXD8P13378 290 aaPredicted RBP8.77□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L15C9J2P7 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L13C9JLJ4 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L11C9JVI0 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L21D6R901 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L18D6R9N7 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L22D6RA61 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L17D6RBQ6 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L19D6RCP7 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L20D6RJB6 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 USP17L24Q0WX57 530 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 C11orf91Q3C1V1 193 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 HFE2Q6ZVN8 426 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 AKTIPQ9H8T0 292 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
RC3H1-205ENST00000484867 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
RC3H1-205ENST00000484867 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
RC3H1-205ENST00000484867 FOXO3O43524 673 aa8.75□□□□□ -1.01
RC3H1-205ENST00000484867 ALX3O95076 343 aa8.75□□□□□ -1.01
RC3H1-205ENST00000484867 FSTP19883 344 aa8.75□□□□□ -1.01
RC3H1-205ENST00000484867 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
RC3H1-205ENST00000484867 GOLGA2P5Q9HBQ8 144 aa8.75□□□□□ -1.01
RC3H1-205ENST00000484867 PLD4Q96BZ4 506 aa8.74□□□□□ -1.01
RC3H1-205ENST00000484867 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
RC3H1-205ENST00000484867 KCNMB2Q9Y691 235 aa8.74□□□□□ -1.01
RC3H1-205ENST00000484867 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
RC3H1-205ENST00000484867 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
RC3H1-205ENST00000484867 CD97P48960 835 aa8.73□□□□□ -1.01
RC3H1-205ENST00000484867 SIK1P57059 783 aa8.73□□□□□ -1.01
RC3H1-205ENST00000484867 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
RC3H1-205ENST00000484867 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
RC3H1-205ENST00000484867 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
RC3H1-205ENST00000484867 J3QW42 95 aa8.72□□□□□ -1.01
RC3H1-205ENST00000484867 XYLBO75191 536 aa8.72□□□□□ -1.01
RC3H1-205ENST00000484867 EIF2AK2P19525 551 aaKnown RBP8.72□□□□□ -1.01
RC3H1-205ENST00000484867 PROSER2Q86WR7 435 aaPredicted RBP8.72□□□□□ -1.01
RC3H1-205ENST00000484867 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
RC3H1-205ENST00000484867 MMP20O60882 483 aa8.71□□□□□ -1.02
RC3H1-205ENST00000484867 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
RC3H1-205ENST00000484867 SOX18P35713 384 aa8.71□□□□□ -1.02
RC3H1-205ENST00000484867 TM4SF5O14894 197 aa8.7□□□□□ -1.02
RC3H1-205ENST00000484867 IL22RA1Q8N6P7 574 aa8.7□□□□□ -1.02
RC3H1-205ENST00000484867 KRTAP4-8A0A0G2JLE6 195 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 MED26O95402 600 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 VRTNQ9H8Y1 702 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 PCMTD2Q9NV79 361 aa8.69□□□□□ -1.02
RC3H1-205ENST00000484867 COX20Q5RI15 118 aa8.68□□□□□ -1.02
RC3H1-205ENST00000484867 UBL7Q96S82 380 aaPredicted RBP8.68□□□□□ -1.02
RC3H1-205ENST00000484867 KIAA1324LA8MWY0 1029 aaPredicted RBP8.67□□□□□ -1.02
RC3H1-205ENST00000484867 PSAPP07602 524 aa8.67□□□□□ -1.02
RC3H1-205ENST00000484867 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
RC3H1-205ENST00000484867 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.67□□□□□ -1.02
RC3H1-205ENST00000484867 RGL4Q8IZJ4 473 aa8.67□□□□□ -1.02
RC3H1-205ENST00000484867 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms