RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
SMC4-215ENST00000484799 COL26A1Q96A83 441 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 CXXC1Q9P0U4 656 aaPredicted RBP8.38□□□□□ -1.07
SMC4-215ENST00000484799 LRFN2Q9ULH4 789 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 FNDC3AQ9Y2H6 1198 aaKnown RBP8.38□□□□□ -1.07
SMC4-215ENST00000484799 STARD13Q9Y3M8 1113 aa8.38□□□□□ -1.07
SMC4-215ENST00000484799 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
SMC4-215ENST00000484799 PSAPP07602 524 aa8.37□□□□□ -1.07
SMC4-215ENST00000484799 USP20Q9Y2K6 914 aa8.37□□□□□ -1.07
SMC4-215ENST00000484799 OPLAHO14841 1288 aa8.36□□□□□ -1.07
SMC4-215ENST00000484799 GATA4P43694 442 aa8.36□□□□□ -1.07
SMC4-215ENST00000484799 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
SMC4-215ENST00000484799 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
SMC4-215ENST00000484799 CLP1Q92989 425 aaKnown RBP8.36□□□□□ -1.07
SMC4-215ENST00000484799 ATP2B4P23634 1241 aa8.35□□□□□ -1.07
SMC4-215ENST00000484799 BAG6P46379 1132 aa8.35□□□□□ -1.07
SMC4-215ENST00000484799 FAM69CQ0P6D2 419 aa8.35□□□□□ -1.07
SMC4-215ENST00000484799 OCLNQ16625 522 aa8.35□□□□□ -1.07
SMC4-215ENST00000484799 MDFIQ99750 246 aa8.35□□□□□ -1.07
SMC4-215ENST00000484799 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
SMC4-215ENST00000484799 GHRHP01286 108 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
SMC4-215ENST00000484799 PLAURQ03405 335 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 ERICH6Q7L0X2 663 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 SAP130Q9H0E3 1048 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 STIM2Q9P246 746 aa8.34□□□□□ -1.07
SMC4-215ENST00000484799 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
SMC4-215ENST00000484799 PCSK2P16519 638 aa8.33□□□□□ -1.08
SMC4-215ENST00000484799 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
SMC4-215ENST00000484799 TTC39BQ5VTQ0 682 aaPredicted RBP8.33□□□□□ -1.08
SMC4-215ENST00000484799 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
SMC4-215ENST00000484799 DMRTC2Q8IXT2 367 aaPredicted RBP8.33□□□□□ -1.08
SMC4-215ENST00000484799 TLR7Q9NYK1 1049 aaKnown RBP8.33□□□□□ -1.08
SMC4-215ENST00000484799 C9orf172C9J069 976 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 K7ELQ4 463 aaPredicted RBP8.32□□□□□ -1.08
SMC4-215ENST00000484799 PROCP04070 461 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 FURINP09958 794 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 NID1P14543 1247 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 CHRNA4P43681 627 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 NLRP13Q86W25 1043 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 MTMR7Q9Y216 660 aa8.32□□□□□ -1.08
SMC4-215ENST00000484799 EGFRP00533 1210 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 ITGB2P05107 769 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
SMC4-215ENST00000484799 NRLP54845 237 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 GPLD1P80108 840 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 AAMPQ13685 434 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 GRIK4Q16099 956 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 WFDC8Q8IUA0 241 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 ETFBKMTQ8IXQ9 262 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
SMC4-215ENST00000484799 USP21Q9UK80 565 aa8.31□□□□□ -1.08
SMC4-215ENST00000484799 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 FAM177BA6PVY3 158 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 ZAP70P43403 619 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 SIK1P57059 783 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
SMC4-215ENST00000484799 DOC2BQ14184 412 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 GPR152Q8TDT2 470 aa8.3□□□□□ -1.08
SMC4-215ENST00000484799 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
SMC4-215ENST00000484799 ELNP15502 786 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 SCNN1AP37088 669 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
SMC4-215ENST00000484799 NSUN5Q96P11 429 aaKnown RBP8.29□□□□□ -1.08
SMC4-215ENST00000484799 ZBTB42B2RXF5 422 aa8.28□□□□□ -1.08
SMC4-215ENST00000484799 J3QW42 95 aa8.28□□□□□ -1.08
SMC4-215ENST00000484799 MMP20O60882 483 aa8.28□□□□□ -1.08
SMC4-215ENST00000484799 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
SMC4-215ENST00000484799 ADAM23O75077 832 aa8.27□□□□□ -1.09
SMC4-215ENST00000484799 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
SMC4-215ENST00000484799 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
SMC4-215ENST00000484799 TTC9Q92623 222 aa8.27□□□□□ -1.09
SMC4-215ENST00000484799 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
SMC4-215ENST00000484799 NAGPAQ9UK23 515 aa8.27□□□□□ -1.09
SMC4-215ENST00000484799 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
SMC4-215ENST00000484799 HYAL2Q12891 473 aa8.26□□□□□ -1.09
SMC4-215ENST00000484799 DTWD1Q8N5C7 304 aa8.26□□□□□ -1.09
SMC4-215ENST00000484799 LPIN3Q9BQK8 851 aa8.26□□□□□ -1.09
SMC4-215ENST00000484799 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
SMC4-215ENST00000484799 SEPT3Q9UH03 358 aa8.26□□□□□ -1.09
SMC4-215ENST00000484799 SOX18P35713 384 aa8.25□□□□□ -1.09
SMC4-215ENST00000484799 NOM1Q5C9Z4 860 aaKnown RBP8.25□□□□□ -1.09
SMC4-215ENST00000484799 IL22RA1Q8N6P7 574 aa8.25□□□□□ -1.09
SMC4-215ENST00000484799 DCAF11Q8TEB1 546 aa8.25□□□□□ -1.09
SMC4-215ENST00000484799 TNFRSF10BO14763 440 aa8.24□□□□□ -1.09
SMC4-215ENST00000484799 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
SMC4-215ENST00000484799 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms