RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 G3V3G9 751 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 PRELPP51888 382 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 G2E3Q7L622 706 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 EYA3Q99504 573 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 CDHR2Q9BYE9 1310 aa11.78□□□□□ -0.52
RPRD1B-205ENST00000484683 SLX4Q8IY92 1834 aa11.77□□□□□ -0.52
RPRD1B-205ENST00000484683 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 HSPA6P17066 643 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 GPC2Q8N158 579 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 ANKIB1Q9P2G1 1089 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 ZNF521Q96K83 1311 aa11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-205ENST00000484683 FZD9O00144 591 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 CTSWP56202 376 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 GCKRQ14397 625 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 SLC4A10Q6U841 1118 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 RTFDC1Q9BY42 306 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
RPRD1B-205ENST00000484683 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 APLP1P51693 650 aa11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 TNIP1Q15025 636 aa11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 AOC3Q16853 763 aa11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 ZNRF3Q9ULT6 936 aa11.75□□□□□ -0.53
RPRD1B-205ENST00000484683 H7C1W4 665 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 KIAA2012Q0VF49 1180 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 PTPRCP08575 1304 aa11.74□□□□□ -0.53
RPRD1B-205ENST00000484683 F6X3S4 739 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 MIER1Q8N108 512 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 SMC4Q9NTJ3 1288 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
RPRD1B-205ENST00000484683 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 XDHP47989 1333 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 ANKRD18BA2A2Z9 1011 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 EPHX2P34913 555 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 TAF7LQ5H9L4 462 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
RPRD1B-205ENST00000484683 GRM8O00222 908 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 UFL1O94874 794 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 ITGA6P23229 1130 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 GPSM2P81274 684 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 GREM2Q9H772 168 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 SBF1O95248 1867 aa11.71□□□□□ -0.53
RPRD1B-205ENST00000484683 KCNJ4P48050 445 aa11.7□□□□□ -0.54
RPRD1B-205ENST00000484683 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPRD1B-205ENST00000484683 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
RPRD1B-205ENST00000484683 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
RPRD1B-205ENST00000484683 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
RPRD1B-205ENST00000484683 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 POTECB2RU33 542 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 H7C1D1 291 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms