RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 TNRC6CQ9HCJ0 1690 aaKnown RBP17.68■□□□□ 0.42
HDLBP-240ENST00000484412 NFKBIEO00221 500 aa17.68■□□□□ 0.42
HDLBP-240ENST00000484412 GRM8O00222 908 aa17.68■□□□□ 0.42
HDLBP-240ENST00000484412 CCT4P50991 539 aaKnown RBP17.68■□□□□ 0.42
HDLBP-240ENST00000484412 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
HDLBP-240ENST00000484412 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
HDLBP-240ENST00000484412 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-240ENST00000484412 ABCC4O15439 1325 aa17.68■□□□□ 0.42
HDLBP-240ENST00000484412 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
HDLBP-240ENST00000484412 LMNB1P20700 586 aa17.67■□□□□ 0.42
HDLBP-240ENST00000484412 LAMB2P55268 1798 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 YY1P25490 414 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 FOXO4P98177 505 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 FKBP4Q02790 459 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDLBP-240ENST00000484412 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 SBF1O95248 1867 aa17.66■□□□□ 0.42
HDLBP-240ENST00000484412 BCAR3O75815 825 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 CTSWP56202 376 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-240ENST00000484412 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-240ENST00000484412 C9orf78Q9NZ63 289 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-240ENST00000484412 WWC3Q9ULE0 1092 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 HDAC5Q9UQL6 1122 aa17.65■□□□□ 0.42
HDLBP-240ENST00000484412 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-240ENST00000484412 PRELPP51888 382 aa17.64■□□□□ 0.41
HDLBP-240ENST00000484412 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
HDLBP-240ENST00000484412 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
HDLBP-240ENST00000484412 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
HDLBP-240ENST00000484412 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-240ENST00000484412 ZKSCAN2Q63HK3 967 aa17.63■□□□□ 0.41
HDLBP-240ENST00000484412 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
HDLBP-240ENST00000484412 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-240ENST00000484412 KAZALD1Q96I82 304 aa17.63■□□□□ 0.41
HDLBP-240ENST00000484412 BSDC1Q9NW68 430 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-240ENST00000484412 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-240ENST00000484412 C9orf131Q5VYM1 1079 aa17.62■□□□□ 0.41
HDLBP-240ENST00000484412 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
HDLBP-240ENST00000484412 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
HDLBP-240ENST00000484412 TRIM27P14373 513 aa17.6■□□□□ 0.41
HDLBP-240ENST00000484412 ANKRD18AQ8IVF6 992 aa17.6■□□□□ 0.41
HDLBP-240ENST00000484412 MPNDQ8N594 471 aa17.6■□□□□ 0.41
HDLBP-240ENST00000484412 GREM2Q9H772 168 aa17.6■□□□□ 0.41
HDLBP-240ENST00000484412 MYH3P11055 1940 aa17.59■□□□□ 0.41
HDLBP-240ENST00000484412 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
HDLBP-240ENST00000484412 MS4A1P11836 297 aa17.59■□□□□ 0.41
HDLBP-240ENST00000484412 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
HDLBP-240ENST00000484412 UTRNP46939 3433 aa17.59■□□□□ 0.41
HDLBP-240ENST00000484412 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
HDLBP-240ENST00000484412 ITGA6P23229 1130 aa17.58■□□□□ 0.4
HDLBP-240ENST00000484412 OLFM4Q6UX06 510 aa17.58■□□□□ 0.4
HDLBP-240ENST00000484412 ZNF784Q8NCA9 323 aaPredicted RBP17.58■□□□□ 0.4
HDLBP-240ENST00000484412 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
HDLBP-240ENST00000484412 FZD9O00144 591 aa17.57■□□□□ 0.4
HDLBP-240ENST00000484412 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
HDLBP-240ENST00000484412 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
HDLBP-240ENST00000484412 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
HDLBP-240ENST00000484412 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
HDLBP-240ENST00000484412 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
HDLBP-240ENST00000484412 MINPP1Q9UNW1 487 aa17.57■□□□□ 0.4
HDLBP-240ENST00000484412 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 GNAI3P08754 354 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 RASSF7Q02833 373 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 DPY19L2Q6NUT2 758 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
HDLBP-240ENST00000484412 TAF1P21675 1872 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 IGHMBP2P38935 993 aaKnown RBP17.55■□□□□ 0.4
HDLBP-240ENST00000484412 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 DPP8Q6V1X1 898 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-240ENST00000484412 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
HDLBP-240ENST00000484412 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-240ENST00000484412 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
HDLBP-240ENST00000484412 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
HDLBP-240ENST00000484412 MTX1Q13505 466 aa17.54■□□□□ 0.4
HDLBP-240ENST00000484412 ANKRD44Q8N8A2 993 aa17.54■□□□□ 0.4
HDLBP-240ENST00000484412 GOLGB1Q14789 3259 aaKnown RBP17.54■□□□□ 0.4
HDLBP-240ENST00000484412 XDHP47989 1333 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-240ENST00000484412 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-240ENST00000484412 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 GPSM2P81274 684 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 JDP2Q8WYK2 163 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 EYA3Q99504 573 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
HDLBP-240ENST00000484412 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-240ENST00000484412 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
HDLBP-240ENST00000484412 PDE3AQ14432 1141 aa17.52■□□□□ 0.4
HDLBP-240ENST00000484412 WASHC4Q2M389 1173 aa17.52■□□□□ 0.4
HDLBP-240ENST00000484412 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms