RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, human

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-208	ENST00000484254	GCKR	Q14397	625 aa		28.21	■■■□□ 2.11
CNTNAP3B-208	ENST00000484254	TMX4	Q9H1E5	349 aa	Predicted RBP	28.21	■■■□□ 2.11
CNTNAP3B-208	ENST00000484254		H7C1W4	665 aa		28.2	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	CT47B1	P0C2W7	299 aa	Predicted RBP	28.2	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	SLC51A	Q86UW1	340 aa		28.2	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	SP8	Q8IXZ3	490 aa		28.2	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	SSH1	Q8WYL5	1049 aa		28.2	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	TAF1	P21675	1872 aa		28.19	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	TMC4	Q7Z404	712 aa		28.19	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.19	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	KDM2B	Q8NHM5	1336 aa		28.18	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	ALDH1L2	Q3SY69	923 aa		28.18	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	BEND3	Q5T5X7	828 aa		28.18	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	CCDC152	Q4G0S7	254 aa		28.17	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	UBE3B	Q7Z3V4	1068 aa		28.17	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	CELF1	Q92879	486 aa	Known RBP	28.17	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	IARS	P41252	1262 aa	Known RBP	28.16	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	GLTPD2	A6NH11	291 aa		28.15	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	PTPRC	P08575	1304 aa		28.15	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	CASP7	P55210	303 aa		28.14	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	CTSW	P56202	376 aa		28.14	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	BCL2L13	Q9BXK5	485 aa		28.14	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	NMRK2	Q9NPI5	230 aa		28.14	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	SEC31B	Q9NQW1	1179 aa		28.14	■■■□□ 2.1
CNTNAP3B-208	ENST00000484254	KIF3C	O14782	793 aa		28.13	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	RPS8	P62241	208 aa	Known RBP	28.13	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	COL4A1	P02462	1669 aa		28.13	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	DPY19L2	Q6NUT2	758 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	SLC4A10	Q6U841	1118 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	MPND	Q8N594	471 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	TTLL11	Q8NHH1	800 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	PLA2G12B	Q9BX93	195 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	SMC4	Q9NTJ3	1288 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	LRRC37A	A6NMS7	1700 aa		28.12	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	ALDH1L1	O75891	902 aa		28.11	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	DPP8	Q6V1X1	898 aa	Predicted RBP	28.11	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	SUPT20H	Q8NEM7	779 aa		28.11	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	MYH3	P11055	1940 aa		28.11	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	SRCIN1	Q9C0H9	1055 aa		28.1	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	C1QTNF8	P60827	252 aa		28.09	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	VPS33B	Q9H267	617 aa		28.09	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	RTL9	Q8NET4	1388 aa		28.09	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	JDP2	Q8WYK2	163 aa		28.08	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	RRAGC	Q9HB90	399 aa		28.08	■■■□□ 2.09
CNTNAP3B-208	ENST00000484254	LARGE2	Q8N3Y3	721 aa		28.07	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	GREM2	Q9H772	168 aa		28.07	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	FZD9	O00144	591 aa		28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	GRM8	O00222	908 aa		28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	BRPF1	P55201	1214 aa	Predicted RBP	28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	ANKRD18A	Q8IVF6	992 aa		28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	CDC5L	Q99459	802 aa	Known RBP	28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	COL4A5	P29400	1685 aa		28.06	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	PPIP5K2	O43314	1243 aa		28.05	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	CSF1R	P07333	972 aa		28.05	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	RARS	P54136	660 aa	Known RBP	28.05	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	ZBED9	Q6R2W3	1325 aa		28.05	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.05	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	WDR90	Q96KV7	1748 aa		28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	DUOX1	Q9NRD9	1551 aa		28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	DDN	O94850	711 aa	Predicted RBP	28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	GPSM2	P81274	684 aa		28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	AOC3	Q16853	763 aa		28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.04	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	ZNF541	Q9H0D2	1346 aa		28.03	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	VEGFA	P15692	232 aa	Predicted RBP	28.03	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	FOXO4	P98177	505 aa		28.02	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	NIM1K	Q8IY84	436 aa		28.02	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	NOB1	Q9ULX3	412 aa	Known RBP	28.02	■■■□□ 2.08
CNTNAP3B-208	ENST00000484254	LTBP1	Q14766	1721 aa		28.01	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	POTEC	B2RU33	542 aa		28.01	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	TOMM70	O94826	608 aa		28.01	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	KIAA2012	Q0VF49	1180 aa		28.01	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	PODXL2	Q9NZ53	605 aa		28.01	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	ITGA6	P23229	1130 aa		28	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	FAM161A	Q3B820	660 aa		28	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	C16orf71	Q8IYS4	520 aa	Predicted RBP	28	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	BSDC1	Q9NW68	430 aa	Predicted RBP	28	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	POLL	Q9UGP5	575 aa		28	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	UTY	O14607	1347 aa		27.99	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	EIF6	P56537	245 aa	Known RBP	27.99	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	C6orf229	H3BNL8	230 aa		27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	EPHA10	Q5JZY3	1008 aa		27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	TBC1D16	Q8TBP0	767 aa		27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	API5	Q9BZZ5	524 aa	Known RBP	27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	ANKIB1	Q9P2G1	1089 aa		27.98	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.97	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	IGHMBP2	P38935	993 aa	Known RBP	27.97	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	WASHC4	Q2M389	1173 aa		27.97	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	GPC2	Q8N158	579 aa		27.97	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	ZNRF3	Q9ULT6	936 aa		27.97	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	KIF16B	Q96L93	1317 aa		27.96	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	LMBR1L	Q6UX01	489 aa		27.96	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	RBM46	Q8TBY0	533 aa	Known RBP	27.96	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	EYA3	Q99504	573 aa		27.96	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	SPEF2	Q9C093	1822 aa		27.96	■■■□□ 2.07
CNTNAP3B-208	ENST00000484254	ANKRD18B	A2A2Z9	1011 aa		27.95	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms