RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 TIAM2Q8IVF5 1701 aa33.65■■■□□ 2.98
GTF3C4-202ENST00000483873 CASP7P55210 303 aa33.64■■■□□ 2.98
GTF3C4-202ENST00000483873 RNF181Q9P0P0 153 aa33.64■■■□□ 2.98
GTF3C4-202ENST00000483873 HSP90B1P14625 803 aaKnown RBP33.63■■■□□ 2.97
GTF3C4-202ENST00000483873 GRAPQ13588 217 aa33.63■■■□□ 2.97
GTF3C4-202ENST00000483873 GRAPLQ8TC17 118 aaPredicted RBP33.63■■■□□ 2.97
GTF3C4-202ENST00000483873 CCDC85AQ96PX6 553 aaPredicted RBP33.62■■■□□ 2.97
GTF3C4-202ENST00000483873 TAOK3Q9H2K8 898 aa33.62■■■□□ 2.97
GTF3C4-202ENST00000483873 BRPF1P55201 1214 aaPredicted RBP33.62■■■□□ 2.97
GTF3C4-202ENST00000483873 SRCIN1Q9C0H9 1055 aa33.62■■■□□ 2.97
GTF3C4-202ENST00000483873 NOB1Q9ULX3 412 aaKnown RBP33.62■■■□□ 2.97
GTF3C4-202ENST00000483873 LTBP3Q9NS15 1303 aa33.61■■■□□ 2.97
GTF3C4-202ENST00000483873 LRRC37AA6NMS7 1700 aa33.61■■■□□ 2.97
GTF3C4-202ENST00000483873 LMNB1P20700 586 aa33.61■■■□□ 2.97
GTF3C4-202ENST00000483873 CELF1Q92879 486 aaKnown RBP33.61■■■□□ 2.97
GTF3C4-202ENST00000483873 SPEF2Q9C093 1822 aa33.6■■■□□ 2.97
GTF3C4-202ENST00000483873 ALDH1L1O75891 902 aa33.6■■■□□ 2.97
GTF3C4-202ENST00000483873 CTSWP56202 376 aa33.6■■■□□ 2.97
GTF3C4-202ENST00000483873 SEC31BQ9NQW1 1179 aa33.6■■■□□ 2.97
GTF3C4-202ENST00000483873 BBOX1O75936 387 aa33.58■■■□□ 2.97
GTF3C4-202ENST00000483873 CCDC152Q4G0S7 254 aa33.58■■■□□ 2.97
GTF3C4-202ENST00000483873 ATP6V0A2Q9Y487 856 aa33.58■■■□□ 2.97
GTF3C4-202ENST00000483873 BCAR3O75815 825 aa33.57■■■□□ 2.96
GTF3C4-202ENST00000483873 FKBP4Q02790 459 aaKnown RBP eCLIP33.57■■■□□ 2.96
GTF3C4-202ENST00000483873 RTKN2Q8IZC4 609 aa33.57■■■□□ 2.96
GTF3C4-202ENST00000483873 GRM8O00222 908 aa33.56■■■□□ 2.96
GTF3C4-202ENST00000483873 CC2D2BQ6DHV5 1058 aa33.56■■■□□ 2.96
GTF3C4-202ENST00000483873 TTLL11Q8NHH1 800 aa33.56■■■□□ 2.96
GTF3C4-202ENST00000483873 YTHDC1Q96MU7 727 aaKnown RBP33.56■■■□□ 2.96
GTF3C4-202ENST00000483873 PLA2G12BQ9BX93 195 aa33.55■■■□□ 2.96
GTF3C4-202ENST00000483873 ZNF277Q9NRM2 450 aaPredicted RBP33.54■■■□□ 2.96
GTF3C4-202ENST00000483873 C9orf78Q9NZ63 289 aaPredicted RBP33.54■■■□□ 2.96
GTF3C4-202ENST00000483873 KIF16BQ96L93 1317 aa33.54■■■□□ 2.96
GTF3C4-202ENST00000483873 SP8Q8IXZ3 490 aa33.53■■■□□ 2.96
GTF3C4-202ENST00000483873 GREM2Q9H772 168 aa33.53■■■□□ 2.96
GTF3C4-202ENST00000483873 ZNF526Q8TF50 670 aaPredicted RBP33.53■■■□□ 2.96
GTF3C4-202ENST00000483873 RPS8P62241 208 aaKnown RBP33.51■■■□□ 2.95
GTF3C4-202ENST00000483873 PSMD1Q99460 953 aa33.51■■■□□ 2.95
GTF3C4-202ENST00000483873 API5Q9BZZ5 524 aaKnown RBP33.51■■■□□ 2.95
GTF3C4-202ENST00000483873 FOXO4P98177 505 aa33.5■■■□□ 2.95
GTF3C4-202ENST00000483873 TMX4Q9H1E5 349 aaPredicted RBP33.5■■■□□ 2.95
GTF3C4-202ENST00000483873 RTL9Q8NET4 1388 aa33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 DUOX1Q9NRD9 1551 aa33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 NBPF7P0C2Y1 421 aaPredicted RBP33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 EPHA10Q5JZY3 1008 aa33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 TMC4Q7Z404 712 aa33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 LTBP1Q14766 1721 aa33.49■■■□□ 2.95
GTF3C4-202ENST00000483873 FAM161AQ3B820 660 aa33.48■■■□□ 2.95
GTF3C4-202ENST00000483873 FRAT1Q92837 279 aaPredicted RBP33.48■■■□□ 2.95
GTF3C4-202ENST00000483873 TNNQ9UQP3 1299 aa33.48■■■□□ 2.95
GTF3C4-202ENST00000483873 UTYO14607 1347 aa33.47■■■□□ 2.95
GTF3C4-202ENST00000483873 COL4A5P29400 1685 aa33.47■■■□□ 2.95
GTF3C4-202ENST00000483873 CSF1RP07333 972 aa33.47■■■□□ 2.95
GTF3C4-202ENST00000483873 GRIPAP1Q4V328 841 aa33.47■■■□□ 2.95
GTF3C4-202ENST00000483873 SUCLG2Q96I99 432 aa33.47■■■□□ 2.95
GTF3C4-202ENST00000483873 IARSP41252 1262 aaKnown RBP33.46■■■□□ 2.95
GTF3C4-202ENST00000483873 ARHGAP45Q92619 1136 aa33.46■■■□□ 2.95
GTF3C4-202ENST00000483873 ANKRD18AQ8IVF6 992 aa33.45■■■□□ 2.95
GTF3C4-202ENST00000483873 MPNDQ8N594 471 aa33.45■■■□□ 2.95
GTF3C4-202ENST00000483873 DPP8Q6V1X1 898 aaPredicted RBP33.45■■■□□ 2.94
GTF3C4-202ENST00000483873 KAZALD1Q96I82 304 aa33.45■■■□□ 2.94
GTF3C4-202ENST00000483873 USP44Q9H0E7 712 aa33.45■■■□□ 2.94
GTF3C4-202ENST00000483873 ZC3H4Q9UPT8 1303 aaKnown RBP33.44■■■□□ 2.94
GTF3C4-202ENST00000483873 TRIM27P14373 513 aa33.44■■■□□ 2.94
GTF3C4-202ENST00000483873 ITGA6P23229 1130 aa33.44■■■□□ 2.94
GTF3C4-202ENST00000483873 CCT4P50991 539 aaKnown RBP33.44■■■□□ 2.94
GTF3C4-202ENST00000483873 CDC5LQ99459 802 aaKnown RBP33.44■■■□□ 2.94
GTF3C4-202ENST00000483873 LMBR1LQ6UX01 489 aa33.43■■■□□ 2.94
GTF3C4-202ENST00000483873 GPSM2P81274 684 aa33.42■■■□□ 2.94
GTF3C4-202ENST00000483873 ATF7IPQ6VMQ6 1270 aa33.42■■■□□ 2.94
GTF3C4-202ENST00000483873 RTFDC1Q9BY42 306 aaPredicted RBP33.42■■■□□ 2.94
GTF3C4-202ENST00000483873 CHMP3Q9Y3E7 222 aa33.42■■■□□ 2.94
GTF3C4-202ENST00000483873 IPO8O15397 1037 aaKnown RBP33.41■■■□□ 2.94
GTF3C4-202ENST00000483873 GPBP1L1Q9HC44 474 aaPredicted RBP33.41■■■□□ 2.94
GTF3C4-202ENST00000483873 NSFL1CQ9UNZ2 370 aaKnown RBP33.41■■■□□ 2.94
GTF3C4-202ENST00000483873 C1QTNF8P60827 252 aa33.38■■■□□ 2.93
GTF3C4-202ENST00000483873 AOC3Q16853 763 aa33.38■■■□□ 2.93
GTF3C4-202ENST00000483873 CLUAP1Q96AJ1 413 aa33.38■■■□□ 2.93
GTF3C4-202ENST00000483873 BICC1Q9H694 974 aaKnown RBP33.38■■■□□ 2.93
GTF3C4-202ENST00000483873 PPIP5K2O43314 1243 aa33.37■■■□□ 2.93
GTF3C4-202ENST00000483873 ZKSCAN2Q63HK3 967 aa33.37■■■□□ 2.93
GTF3C4-202ENST00000483873 SUPT20HQ8NEM7 779 aa33.37■■■□□ 2.93
GTF3C4-202ENST00000483873 A0A1B0GUL6 1792 aa33.37■■■□□ 2.93
GTF3C4-202ENST00000483873 INTS3Q68E01 1043 aaKnown RBP33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 LARGE2Q8N3Y3 721 aa33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 ANKRD18BA2A2Z9 1011 aa33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 IGHMBP2P38935 993 aaKnown RBP33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 BSDC1Q9NW68 430 aaPredicted RBP33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 POLLQ9UGP5 575 aa33.36■■■□□ 2.93
GTF3C4-202ENST00000483873 GLTPD2A6NH11 291 aa33.35■■■□□ 2.93
GTF3C4-202ENST00000483873 IFIT5Q13325 482 aaKnown RBP33.35■■■□□ 2.93
GTF3C4-202ENST00000483873 ANKRD44Q8N8A2 993 aa33.35■■■□□ 2.93
GTF3C4-202ENST00000483873 NMRK2Q9NPI5 230 aa33.35■■■□□ 2.93
GTF3C4-202ENST00000483873 GPR101Q96P66 508 aaPredicted RBP33.34■■■□□ 2.93
GTF3C4-202ENST00000483873 MINPP1Q9UNW1 487 aa33.34■■■□□ 2.93
GTF3C4-202ENST00000483873 KDM2BQ8NHM5 1336 aa33.34■■■□□ 2.93
GTF3C4-202ENST00000483873 ZNF541Q9H0D2 1346 aa33.34■■■□□ 2.93
GTF3C4-202ENST00000483873 RABL6Q3YEC7 729 aaPredicted RBP33.33■■■□□ 2.93
GTF3C4-202ENST00000483873 JDP2Q8WYK2 163 aa33.33■■■□□ 2.93
GTF3C4-202ENST00000483873 PODXL2Q9NZ53 605 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms