RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
PCCB-216ENST00000483687 ST5P78524 1137 aa23.59■■□□□ 1.37
PCCB-216ENST00000483687 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
PCCB-216ENST00000483687 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
PCCB-216ENST00000483687 SURF6O75683 361 aaKnown RBP23.59■■□□□ 1.37
PCCB-216ENST00000483687 R3HDM1Q15032 1099 aaKnown RBP23.59■■□□□ 1.37
PCCB-216ENST00000483687 NRXN2Q9P2S2 1712 aa23.58■■□□□ 1.37
PCCB-216ENST00000483687 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.37
PCCB-216ENST00000483687 GREM2Q9H772 168 aa23.58■■□□□ 1.37
PCCB-216ENST00000483687 PA2G4Q9UQ80 394 aaKnown RBP23.58■■□□□ 1.37
PCCB-216ENST00000483687 RFX5P48382 616 aaPredicted RBP23.57■■□□□ 1.36
PCCB-216ENST00000483687 IFIT5Q13325 482 aaKnown RBP23.57■■□□□ 1.36
PCCB-216ENST00000483687 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
PCCB-216ENST00000483687 KLHDC4Q8TBB5 520 aa23.57■■□□□ 1.36
PCCB-216ENST00000483687 NLRP3Q96P20 1036 aa23.57■■□□□ 1.36
PCCB-216ENST00000483687 TNRC6CQ9HCJ0 1690 aaKnown RBP23.56■■□□□ 1.36
PCCB-216ENST00000483687 ITGA6P23229 1130 aa23.56■■□□□ 1.36
PCCB-216ENST00000483687 PTPN12Q05209 780 aaKnown RBP23.56■■□□□ 1.36
PCCB-216ENST00000483687 C3orf67Q6ZVT6 689 aa23.56■■□□□ 1.36
PCCB-216ENST00000483687 APBB1O00213 710 aa23.55■■□□□ 1.36
PCCB-216ENST00000483687 SIL1Q9H173 461 aa23.55■■□□□ 1.36
PCCB-216ENST00000483687 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
PCCB-216ENST00000483687 NOP58Q9Y2X3 529 aaKnown RBP23.55■■□□□ 1.36
PCCB-216ENST00000483687 RIC1Q4ADV7 1423 aa23.54■■□□□ 1.36
PCCB-216ENST00000483687 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
PCCB-216ENST00000483687 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
PCCB-216ENST00000483687 SF3B3Q15393 1217 aaKnown RBP23.54■■□□□ 1.36
PCCB-216ENST00000483687 HSP90AB4PQ58FF6 505 aa23.54■■□□□ 1.36
PCCB-216ENST00000483687 ANKRD45Q5TZF3 282 aa23.54■■□□□ 1.36
PCCB-216ENST00000483687 TAF7LQ5H9L4 462 aa23.53■■□□□ 1.36
PCCB-216ENST00000483687 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
PCCB-216ENST00000483687 G3BP1Q13283 466 aaKnown RBP eCLIP23.53■■□□□ 1.364e-6■■■□□ 16.9
PCCB-216ENST00000483687 ZNF594Q96JF6 807 aaPredicted RBP23.53■■□□□ 1.36
PCCB-216ENST00000483687 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
PCCB-216ENST00000483687 PSDA5PKW4 1024 aaPredicted RBP23.52■■□□□ 1.36
PCCB-216ENST00000483687 RAB11FIP3O75154 756 aa23.52■■□□□ 1.36
PCCB-216ENST00000483687 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
PCCB-216ENST00000483687 NUCB1Q02818 461 aa23.52■■□□□ 1.36
PCCB-216ENST00000483687 ZBTB47Q9UFB7 747 aaPredicted RBP23.52■■□□□ 1.36
PCCB-216ENST00000483687 LRRCC1Q9C099 1032 aa23.5■■□□□ 1.35
PCCB-216ENST00000483687 SEC31BQ9NQW1 1179 aa23.5■■□□□ 1.35
PCCB-216ENST00000483687 ANKRD31Q8N7Z5 1873 aa23.5■■□□□ 1.35
PCCB-216ENST00000483687 CHD1LQ86WJ1 897 aa23.5■■□□□ 1.35
PCCB-216ENST00000483687 MTFR1LQ9H019 292 aa23.5■■□□□ 1.35
PCCB-216ENST00000483687 ERC1Q8IUD2 1116 aa23.49■■□□□ 1.35
PCCB-216ENST00000483687 KIF1BPQ96EK5 621 aa23.49■■□□□ 1.35
PCCB-216ENST00000483687 LNPKQ9C0E8 428 aa23.49■■□□□ 1.35
PCCB-216ENST00000483687 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
PCCB-216ENST00000483687 TAF1P21675 1872 aa23.49■■□□□ 1.35
PCCB-216ENST00000483687 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
PCCB-216ENST00000483687 SPEF2Q9C093 1822 aa23.48■■□□□ 1.35
PCCB-216ENST00000483687 EYA2O00167 538 aa23.47■■□□□ 1.35
PCCB-216ENST00000483687 SMARCA5O60264 1052 aaPredicted RBP23.47■■□□□ 1.35
PCCB-216ENST00000483687 SKAP1Q86WV1 359 aa23.47■■□□□ 1.35
PCCB-216ENST00000483687 RHPN1Q8TCX5 695 aa23.47■■□□□ 1.35
PCCB-216ENST00000483687 CDC5LQ99459 802 aaKnown RBP23.47■■□□□ 1.35
PCCB-216ENST00000483687 LDHAL6AQ6ZMR3 332 aa23.47■■□□□ 1.35
PCCB-216ENST00000483687 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
PCCB-216ENST00000483687 ATF5Q9Y2D1 282 aaPredicted RBP23.47■■□□□ 1.35
PCCB-216ENST00000483687 CIAO1O76071 339 aa23.46■■□□□ 1.35
PCCB-216ENST00000483687 IGHMBP2P38935 993 aaKnown RBP23.46■■□□□ 1.35
PCCB-216ENST00000483687 CRY2Q49AN0 593 aa23.46■■□□□ 1.35
PCCB-216ENST00000483687 LRRC24Q50LG9 513 aa23.46■■□□□ 1.35
PCCB-216ENST00000483687 DDX46Q7L014 1031 aaKnown RBP23.46■■□□□ 1.35
PCCB-216ENST00000483687 RPGRQ92834 1020 aaKnown RBP23.46■■□□□ 1.35
PCCB-216ENST00000483687 PUS3Q9BZE2 481 aaKnown RBP23.46■■□□□ 1.35
PCCB-216ENST00000483687 SASH1O94885 1247 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 IL15P40933 162 aaPredicted RBP23.45■■□□□ 1.34
PCCB-216ENST00000483687 ATG9AQ7Z3C6 839 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 MPHOSPH8Q99549 860 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 IL1RAPL2Q9NP60 686 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 CNNM1Q9NRU3 951 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 LRP5O75197 1615 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.34
PCCB-216ENST00000483687 POLD1P28340 1107 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 PDE6BP35913 854 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 ANKRD18AQ8IVF6 992 aa23.45■■□□□ 1.34
PCCB-216ENST00000483687 COL4A1P02462 1669 aa23.44■■□□□ 1.34
PCCB-216ENST00000483687 RGS3P49796 1198 aa23.43■■□□□ 1.34
PCCB-216ENST00000483687 CELF1Q92879 486 aaKnown RBP23.43■■□□□ 1.34
PCCB-216ENST00000483687 TFCP2Q12800 502 aa23.42■■□□□ 1.34
PCCB-216ENST00000483687 RBM17Q96I25 401 aaKnown RBP23.42■■□□□ 1.34
PCCB-216ENST00000483687 RIPOR2Q9Y4F9 1068 aa23.42■■□□□ 1.34
PCCB-216ENST00000483687 COL11A2P13942 1736 aaPredicted RBP23.41■■□□□ 1.34
PCCB-216ENST00000483687 PDE4AP27815 886 aa23.41■■□□□ 1.34
PCCB-216ENST00000483687 RPS8P62241 208 aaKnown RBP23.41■■□□□ 1.34
PCCB-216ENST00000483687 CLASRPQ8N2M8 674 aaKnown RBP23.41■■□□□ 1.34
PCCB-216ENST00000483687 GRAPQ13588 217 aa23.4■■□□□ 1.34
PCCB-216ENST00000483687 GRAPLQ8TC17 118 aaPredicted RBP23.4■■□□□ 1.34
PCCB-216ENST00000483687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.4■■□□□ 1.34
PCCB-216ENST00000483687 C10orf71Q711Q0 1435 aa23.4■■□□□ 1.34
PCCB-216ENST00000483687 SRGNP10124 158 aa23.39■■□□□ 1.34
PCCB-216ENST00000483687 METTL24Q5JXM2 366 aa23.39■■□□□ 1.34
PCCB-216ENST00000483687 C16orf71Q8IYS4 520 aaPredicted RBP23.39■■□□□ 1.34
PCCB-216ENST00000483687 BSDC1Q9NW68 430 aaPredicted RBP23.39■■□□□ 1.34
PCCB-216ENST00000483687 CEP126Q9P2H0 1117 aa23.39■■□□□ 1.34
PCCB-216ENST00000483687 HOXA10P31260 410 aaPredicted RBP23.39■■□□□ 1.33
PCCB-216ENST00000483687 MROH5Q6ZUA9 1318 aa23.39■■□□□ 1.33
PCCB-216ENST00000483687 NPR1P16066 1061 aa23.38■■□□□ 1.33
PCCB-216ENST00000483687 H0YIN7 160 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms