RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 PDE1AP54750 535 aa19.98■□□□□ 0.79
RFTN1-209ENST00000483671 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
RFTN1-209ENST00000483671 CLASRPQ8N2M8 674 aaKnown RBP19.98■□□□□ 0.79
RFTN1-209ENST00000483671 KLHDC4Q8TBB5 520 aa19.98■□□□□ 0.79
RFTN1-209ENST00000483671 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
RFTN1-209ENST00000483671 EYA2O00167 538 aa19.97■□□□□ 0.79
RFTN1-209ENST00000483671 GYS1P13807 737 aa19.97■□□□□ 0.79
RFTN1-209ENST00000483671 MX1P20591 662 aa19.97■□□□□ 0.79
RFTN1-209ENST00000483671 IL15P40933 162 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-209ENST00000483671 TTC22Q5TAA0 569 aa19.97■□□□□ 0.79
RFTN1-209ENST00000483671 IL1RAPL2Q9NP60 686 aa19.97■□□□□ 0.79
RFTN1-209ENST00000483671 LRP5O75197 1615 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 SIL1Q9H173 461 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 GREM2Q9H772 168 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 TFCP2L1Q9NZI6 479 aa19.96■□□□□ 0.79
RFTN1-209ENST00000483671 HCLS1P14317 486 aaPredicted RBP19.95■□□□□ 0.78
RFTN1-209ENST00000483671 NFIXQ14938 502 aa19.95■□□□□ 0.78
RFTN1-209ENST00000483671 SF3B3Q15393 1217 aaKnown RBP19.95■□□□□ 0.78
RFTN1-209ENST00000483671 TPTE2Q6XPS3 522 aa19.95■□□□□ 0.78
RFTN1-209ENST00000483671 GPR108Q9NPR9 543 aa19.95■□□□□ 0.78
RFTN1-209ENST00000483671 TUBGCP6Q96RT7 1819 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 ANKRD18BA2A2Z9 1011 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 ITGA6P23229 1130 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 TM4SF1P30408 202 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 ERFEQ4G0M1 354 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 NBPF5PQ86XG9 351 aaPredicted RBP19.94■□□□□ 0.78
RFTN1-209ENST00000483671 NUTM1Q86Y26 1132 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 TTC41PQ6P2S7 1318 aa19.94■□□□□ 0.78
RFTN1-209ENST00000483671 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
RFTN1-209ENST00000483671 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
RFTN1-209ENST00000483671 BAG6P46379 1132 aa19.93■□□□□ 0.78
RFTN1-209ENST00000483671 SF3B2Q13435 895 aaKnown RBP19.93■□□□□ 0.78
RFTN1-209ENST00000483671 BICDL1Q6ZP65 573 aa19.93■□□□□ 0.78
RFTN1-209ENST00000483671 ABCC12Q96J65 1359 aa19.92■□□□□ 0.78
RFTN1-209ENST00000483671 QSER1Q2KHR3 1735 aa19.92■□□□□ 0.78
RFTN1-209ENST00000483671 EN1Q05925 392 aaPredicted RBP19.92■□□□□ 0.78
RFTN1-209ENST00000483671 EZH2Q15910 746 aaKnown RBP19.92■□□□□ 0.78
RFTN1-209ENST00000483671 EAF2Q96CJ1 260 aaPredicted RBP19.92■□□□□ 0.78
RFTN1-209ENST00000483671 TFCP2Q12800 502 aa19.91■□□□□ 0.78
RFTN1-209ENST00000483671 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
RFTN1-209ENST00000483671 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-209ENST00000483671 ZNF594Q96JF6 807 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-209ENST00000483671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-209ENST00000483671 IFIT2P09913 472 aaKnown RBP19.9■□□□□ 0.78
RFTN1-209ENST00000483671 LRRC24Q50LG9 513 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 TNNI3KQ59H18 835 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 AACSQ86V21 672 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 GPATCH3Q96I76 525 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 RIPOR2Q9Y4F9 1068 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 FPGT-TNNI3KV9GXZ4 949 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 PNPLA7Q6ZV29 1317 aa19.9■□□□□ 0.78
RFTN1-209ENST00000483671 GTF2E1P29083 439 aaPredicted RBP19.89■□□□□ 0.77
RFTN1-209ENST00000483671 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
RFTN1-209ENST00000483671 PI4K2BQ8TCG2 481 aa19.89■□□□□ 0.77
RFTN1-209ENST00000483671 PUS3Q9BZE2 481 aaKnown RBP19.89■□□□□ 0.77
RFTN1-209ENST00000483671 ECHDC1Q9NTX5 307 aa19.89■□□□□ 0.77
RFTN1-209ENST00000483671 SLC15A2Q16348 729 aa19.88■□□□□ 0.77
RFTN1-209ENST00000483671 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
RFTN1-209ENST00000483671 ZNF609O15014 1411 aa19.88■□□□□ 0.77
RFTN1-209ENST00000483671 ERC2O15083 957 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 GLRX3O76003 335 aaKnown RBP19.87■□□□□ 0.77
RFTN1-209ENST00000483671 LDHAL6AQ6ZMR3 332 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 CNBD1Q8NA66 436 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 NLRP3Q96P20 1036 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
RFTN1-209ENST00000483671 STK32BQ9NY57 414 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 CEP126Q9P2H0 1117 aa19.87■□□□□ 0.77
RFTN1-209ENST00000483671 POLRMTO00411 1230 aaKnown RBP19.86■□□□□ 0.77
RFTN1-209ENST00000483671 SDSP20132 328 aa19.86■□□□□ 0.77
RFTN1-209ENST00000483671 PRR5LQ6MZQ0 368 aa19.86■□□□□ 0.77
RFTN1-209ENST00000483671 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
RFTN1-209ENST00000483671 CDC5LQ99459 802 aaKnown RBP19.86■□□□□ 0.77
RFTN1-209ENST00000483671 AKAP2Q9Y2D5 859 aa19.86■□□□□ 0.77
RFTN1-209ENST00000483671 MROH5Q6ZUA9 1318 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 CDC45O75419 566 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 SERPINB2P05120 415 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 DDR1Q08345 913 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 VGLL2Q8N8G2 317 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 DBNLQ9UJU6 430 aaKnown RBP19.85■□□□□ 0.77
RFTN1-209ENST00000483671 NRXN2Q9P2S2 1712 aa19.85■□□□□ 0.77
RFTN1-209ENST00000483671 CASZ1Q86V15 1759 aa19.84■□□□□ 0.77
RFTN1-209ENST00000483671 TSHZ3Q63HK5 1081 aa19.84■□□□□ 0.77
RFTN1-209ENST00000483671 CCDC8Q9H0W5 538 aaPredicted RBP19.84■□□□□ 0.77
RFTN1-209ENST00000483671 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
RFTN1-209ENST00000483671 SEC31BQ9NQW1 1179 aa19.84■□□□□ 0.77
RFTN1-209ENST00000483671 CNNM1Q9NRU3 951 aa19.84■□□□□ 0.77
RFTN1-209ENST00000483671 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
RFTN1-209ENST00000483671 EIF5BO60841 1220 aaKnown RBP19.83■□□□□ 0.77
RFTN1-209ENST00000483671 IGHMBP2P38935 993 aaKnown RBP19.83■□□□□ 0.77
RFTN1-209ENST00000483671 DEFB132Q7Z7B7 95 aa19.83■□□□□ 0.77
RFTN1-209ENST00000483671 TLR7Q9NYK1 1049 aaKnown RBP19.83■□□□□ 0.77
RFTN1-209ENST00000483671 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
RFTN1-209ENST00000483671 ATP5JP18859 108 aa19.82■□□□□ 0.76
RFTN1-209ENST00000483671 ST5P78524 1137 aa19.82■□□□□ 0.76
RFTN1-209ENST00000483671 CRY2Q49AN0 593 aa19.82■□□□□ 0.76
RFTN1-209ENST00000483671 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms