RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 DDX58O95786 925 aaKnown RBP25.61■■□□□ 1.69
HPS4-213ENST00000483631 POTEIP0CG38 1075 aa25.61■■□□□ 1.69
HPS4-213ENST00000483631 POTEJP0CG39 1038 aa25.61■■□□□ 1.69
HPS4-213ENST00000483631 FAM89AQ96GI7 184 aa25.61■■□□□ 1.69
HPS4-213ENST00000483631 PHAXQ9H814 394 aaKnown RBP25.61■■□□□ 1.69
HPS4-213ENST00000483631 TAF1P21675 1872 aa25.61■■□□□ 1.69
HPS4-213ENST00000483631 DPP8Q6V1X1 898 aaPredicted RBP25.6■■□□□ 1.69
HPS4-213ENST00000483631 MPNDQ8N594 471 aa25.6■■□□□ 1.69
HPS4-213ENST00000483631 ZBTB38Q8NAP3 1195 aaPredicted RBP25.6■■□□□ 1.69
HPS4-213ENST00000483631 CCDC191Q8NCU4 936 aa25.6■■□□□ 1.69
HPS4-213ENST00000483631 CACNA1FO60840 1977 aa25.59■■□□□ 1.69
HPS4-213ENST00000483631 CREBZFQ9NS37 354 aa25.59■■□□□ 1.69
HPS4-213ENST00000483631 SLC51AQ86UW1 340 aa25.58■■□□□ 1.69
HPS4-213ENST00000483631 PASKQ96RG2 1323 aa25.58■■□□□ 1.69
HPS4-213ENST00000483631 IRS4O14654 1257 aaPredicted RBP25.57■■□□□ 1.68
HPS4-213ENST00000483631 LMOD1P29536 600 aaPredicted RBP25.57■■□□□ 1.68
HPS4-213ENST00000483631 KIAA2012Q0VF49 1180 aa25.57■■□□□ 1.68
HPS4-213ENST00000483631 AOC3Q16853 763 aa25.57■■□□□ 1.68
HPS4-213ENST00000483631 TSPYL6Q8N831 410 aa25.57■■□□□ 1.68
HPS4-213ENST00000483631 METTL22Q9BUU2 404 aaPredicted RBP25.57■■□□□ 1.68
HPS4-213ENST00000483631 ZNRF3Q9ULT6 936 aa25.56■■□□□ 1.68
HPS4-213ENST00000483631 GJA3Q9Y6H8 435 aa25.56■■□□□ 1.68
HPS4-213ENST00000483631 PCCAP05165 728 aaPredicted RBP25.55■■□□□ 1.68
HPS4-213ENST00000483631 EAPPQ56P03 285 aaPredicted RBP25.55■■□□□ 1.68
HPS4-213ENST00000483631 TSR2Q969E8 191 aaKnown RBP25.55■■□□□ 1.68
HPS4-213ENST00000483631 MYD88Q99836 296 aa25.55■■□□□ 1.68
HPS4-213ENST00000483631 STK31Q9BXU1 1019 aa25.55■■□□□ 1.68
HPS4-213ENST00000483631 LTBP1Q14766 1721 aa25.54■■□□□ 1.68
HPS4-213ENST00000483631 DUOX1Q9NRD9 1551 aa25.54■■□□□ 1.68
HPS4-213ENST00000483631 ITGBL1O95965 494 aaPredicted RBP25.54■■□□□ 1.68
HPS4-213ENST00000483631 SCNN1DP51172 638 aa25.54■■□□□ 1.68
HPS4-213ENST00000483631 CWC25Q9NXE8 425 aaPredicted RBP25.54■■□□□ 1.68
HPS4-213ENST00000483631 TWISTNBQ3B726 338 aaPredicted RBP25.53■■□□□ 1.68
HPS4-213ENST00000483631 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
HPS4-213ENST00000483631 WDR63Q8IWG1 891 aa25.53■■□□□ 1.68
HPS4-213ENST00000483631 CDHR2Q9BYE9 1310 aa25.53■■□□□ 1.68
HPS4-213ENST00000483631 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
HPS4-213ENST00000483631 CLEC11AQ9Y240 323 aa25.52■■□□□ 1.68
HPS4-213ENST00000483631 CXCL9Q07325 125 aa25.51■■□□□ 1.67
HPS4-213ENST00000483631 USP50Q70EL3 339 aaPredicted RBP25.51■■□□□ 1.67
HPS4-213ENST00000483631 ZNF428Q96B54 188 aa25.51■■□□□ 1.67
HPS4-213ENST00000483631 PDE8AO60658 829 aa25.5■■□□□ 1.67
HPS4-213ENST00000483631 RPS8P62241 208 aaKnown RBP25.5■■□□□ 1.67
HPS4-213ENST00000483631 RTL5Q5HYW3 569 aaPredicted RBP25.5■■□□□ 1.67
HPS4-213ENST00000483631 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
HPS4-213ENST00000483631 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
HPS4-213ENST00000483631 CIAPIN1Q6FI81 312 aa25.49■■□□□ 1.67
HPS4-213ENST00000483631 CNTROBQ8N137 903 aa25.49■■□□□ 1.67
HPS4-213ENST00000483631 MYH3P11055 1940 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 PI4KAP2A4QPH2 592 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 EPS15P42566 896 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 NEXNQ0ZGT2 675 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 TNIP1Q15025 636 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 PI4KAP1Q8N8J0 262 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 GPRC5DQ9NZD1 345 aa25.48■■□□□ 1.67
HPS4-213ENST00000483631 NSFL1CQ9UNZ2 370 aaKnown RBP25.48■■□□□ 1.67
HPS4-213ENST00000483631 FANCIQ9NVI1 1328 aa25.47■■□□□ 1.67
HPS4-213ENST00000483631 TMEM88BA6NKF7 163 aa25.47■■□□□ 1.67
HPS4-213ENST00000483631 ADARB2Q9NS39 739 aaKnown RBP25.47■■□□□ 1.67
HPS4-213ENST00000483631 WASHC4Q2M389 1173 aa25.46■■□□□ 1.67
HPS4-213ENST00000483631 EYA3Q99504 573 aa25.46■■□□□ 1.67
HPS4-213ENST00000483631 PODXL2Q9NZ53 605 aa25.46■■□□□ 1.67
HPS4-213ENST00000483631 COL4A1P02462 1669 aa25.45■■□□□ 1.67
HPS4-213ENST00000483631 SLC4A2P04920 1241 aa25.45■■□□□ 1.66
HPS4-213ENST00000483631 IGKV5-2P06315 115 aa25.45■■□□□ 1.66
HPS4-213ENST00000483631 MAP1SQ66K74 1059 aaPredicted RBP25.45■■□□□ 1.66
HPS4-213ENST00000483631 CNTNAP1P78357 1384 aa25.44■■□□□ 1.66
HPS4-213ENST00000483631 GPSM2P81274 684 aa25.44■■□□□ 1.66
HPS4-213ENST00000483631 POLLQ9UGP5 575 aa25.43■■□□□ 1.66
HPS4-213ENST00000483631 YDJCA8MPS7 323 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 C6orf229H3BNL8 230 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 GMPSP49915 693 aaPredicted RBP25.42■■□□□ 1.66
HPS4-213ENST00000483631 FLIIQ13045 1269 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 SEC31BQ9NQW1 1179 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 TRPM7Q96QT4 1865 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 RTL9Q8NET4 1388 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 PCNTO95613 3336 aa25.42■■□□□ 1.66
HPS4-213ENST00000483631 NEURL1BA8MQ27 555 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 VAMP4O75379 141 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 RAD17O75943 681 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 G2E3Q7L622 706 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 TBC1D16Q8TBP0 767 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 BCL2L13Q9BXK5 485 aa25.41■■□□□ 1.66
HPS4-213ENST00000483631 CTSWP56202 376 aa25.4■■□□□ 1.66
HPS4-213ENST00000483631 ZC3H15Q8WU90 426 aaKnown RBP25.4■■□□□ 1.66
HPS4-213ENST00000483631 DPF2Q92785 391 aa25.4■■□□□ 1.66
HPS4-213ENST00000483631 MKRN1Q9UHC7 482 aaKnown RBP25.4■■□□□ 1.66
HPS4-213ENST00000483631 ANKRD18AQ8IVF6 992 aa25.39■■□□□ 1.66
HPS4-213ENST00000483631 CDC5LQ99459 802 aaKnown RBP25.39■■□□□ 1.66
HPS4-213ENST00000483631 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.66
HPS4-213ENST00000483631 RASSF10A6NK89 507 aa25.38■■□□□ 1.65
HPS4-213ENST00000483631 H7C1W4 665 aa25.38■■□□□ 1.65
HPS4-213ENST00000483631 RPS12P25398 132 aaKnown RBP25.38■■□□□ 1.65
HPS4-213ENST00000483631 ZC3H12CQ9C0D7 883 aaKnown RBP25.38■■□□□ 1.65
HPS4-213ENST00000483631 MYH16Q9H6N6 1097 aa25.38■■□□□ 1.65
HPS4-213ENST00000483631 HSPA1AP0DMV8 641 aaKnown RBP25.37■■□□□ 1.65
HPS4-213ENST00000483631 HSPA1BP0DMV9 641 aaKnown RBP25.37■■□□□ 1.65
HPS4-213ENST00000483631 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
HPS4-213ENST00000483631 CWF19L2Q2TBE0 894 aaKnown RBP25.37■■□□□ 1.65
HPS4-213ENST00000483631 TTLL11Q8NHH1 800 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms