RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 COL4A5P29400 1685 aa12.28□□□□□ -0.44
HMG20B-210ENST00000483417 F6X3S4 739 aa12.27□□□□□ -0.45
HMG20B-210ENST00000483417 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
HMG20B-210ENST00000483417 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
HMG20B-210ENST00000483417 HTRA3P83110 453 aa12.27□□□□□ -0.45
HMG20B-210ENST00000483417 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
HMG20B-210ENST00000483417 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
HMG20B-210ENST00000483417 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
HMG20B-210ENST00000483417 LAMB2P55268 1798 aa12.26□□□□□ -0.45
HMG20B-210ENST00000483417 PI4KAP2A4QPH2 592 aa12.26□□□□□ -0.45
HMG20B-210ENST00000483417 FLIIQ13045 1269 aa12.26□□□□□ -0.45
HMG20B-210ENST00000483417 PI4KAP1Q8N8J0 262 aa12.26□□□□□ -0.45
HMG20B-210ENST00000483417 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
HMG20B-210ENST00000483417 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
HMG20B-210ENST00000483417 GRAPQ13588 217 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
HMG20B-210ENST00000483417 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 GPC2Q8N158 579 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 GRAPLQ8TC17 118 aaPredicted RBP12.25□□□□□ -0.45
HMG20B-210ENST00000483417 JARID2Q92833 1246 aaPredicted RBP12.25□□□□□ -0.45
HMG20B-210ENST00000483417 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
HMG20B-210ENST00000483417 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
HMG20B-210ENST00000483417 PLIN1O60240 522 aa12.24□□□□□ -0.45
HMG20B-210ENST00000483417 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
HMG20B-210ENST00000483417 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
HMG20B-210ENST00000483417 DDX60Q8IY21 1712 aaKnown RBP12.24□□□□□ -0.45
HMG20B-210ENST00000483417 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
HMG20B-210ENST00000483417 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
HMG20B-210ENST00000483417 JDP2Q8WYK2 163 aa12.24□□□□□ -0.45
HMG20B-210ENST00000483417 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
HMG20B-210ENST00000483417 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
HMG20B-210ENST00000483417 SCN4AP35499 1836 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
HMG20B-210ENST00000483417 ITGBL1O95965 494 aaPredicted RBP12.23□□□□□ -0.45
HMG20B-210ENST00000483417 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
HMG20B-210ENST00000483417 RTL5Q5HYW3 569 aaPredicted RBP12.23□□□□□ -0.45
HMG20B-210ENST00000483417 LARGE2Q8N3Y3 721 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 MPNDQ8N594 471 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 JMYQ8N9B5 988 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 KLRG1Q96E93 195 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 MYD88Q99836 296 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 RCAN3Q9UKA8 241 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 TAF1P21675 1872 aa12.23□□□□□ -0.45
HMG20B-210ENST00000483417 EPHX2P34913 555 aa12.22□□□□□ -0.45
HMG20B-210ENST00000483417 BRPF1P55201 1214 aaPredicted RBP12.22□□□□□ -0.45
HMG20B-210ENST00000483417 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
HMG20B-210ENST00000483417 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
HMG20B-210ENST00000483417 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
HMG20B-210ENST00000483417 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
HMG20B-210ENST00000483417 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
HMG20B-210ENST00000483417 COL4A1P02462 1669 aa12.22□□□□□ -0.45
HMG20B-210ENST00000483417 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 PCCAP05165 728 aaPredicted RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 SCNN1DP51172 638 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 CXCL9Q07325 125 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 KIAA2012Q0VF49 1180 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 AOC3Q16853 763 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 CWF19L2Q2TBE0 894 aaKnown RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 DPP8Q6V1X1 898 aaPredicted RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
HMG20B-210ENST00000483417 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
HMG20B-210ENST00000483417 ADAMTSL1Q8N6G6 1762 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
HMG20B-210ENST00000483417 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 DNAAF4Q8WXU2 420 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
HMG20B-210ENST00000483417 DUOX1Q9NRD9 1551 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 PDE8AO60658 829 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 RLBP1P12271 317 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 EPS15P42566 896 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 PNMA8AQ86V59 439 aaPredicted RBP12.19□□□□□ -0.46
HMG20B-210ENST00000483417 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 GJA3Q9Y6H8 435 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 LRRC37AA6NMS7 1700 aa12.19□□□□□ -0.46
HMG20B-210ENST00000483417 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 NEURL1BA8MQ27 555 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 H7C1W4 665 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 TRIM27P14373 513 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
HMG20B-210ENST00000483417 GPSM2P81274 684 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
HMG20B-210ENST00000483417 NSFL1CQ9UNZ2 370 aaKnown RBP12.18□□□□□ -0.46
HMG20B-210ENST00000483417 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-210ENST00000483417 CNTROBQ8N137 903 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms