RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PDE8AO60658 829 aa17.02■□□□□ 0.32
SSR1-208ENST00000483409 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
SSR1-208ENST00000483409 LMNB1P20700 586 aa17.02■□□□□ 0.32
SSR1-208ENST00000483409 GRAPQ13588 217 aa17.01■□□□□ 0.31
SSR1-208ENST00000483409 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
SSR1-208ENST00000483409 CCDC85AQ96PX6 553 aaPredicted RBP17.01■□□□□ 0.31
SSR1-208ENST00000483409 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
SSR1-208ENST00000483409 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
SSR1-208ENST00000483409 H7C1W4 665 aa17■□□□□ 0.31
SSR1-208ENST00000483409 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
SSR1-208ENST00000483409 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
SSR1-208ENST00000483409 SNED1Q8TER0 1413 aa17■□□□□ 0.31
SSR1-208ENST00000483409 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
SSR1-208ENST00000483409 CASP7P55210 303 aa16.99■□□□□ 0.31
SSR1-208ENST00000483409 CTSWP56202 376 aa16.99■□□□□ 0.31
SSR1-208ENST00000483409 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSR1-208ENST00000483409 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
SSR1-208ENST00000483409 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
SSR1-208ENST00000483409 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
SSR1-208ENST00000483409 BBOX1O75936 387 aa16.98■□□□□ 0.31
SSR1-208ENST00000483409 CC2D2BQ6DHV5 1058 aa16.98■□□□□ 0.31
SSR1-208ENST00000483409 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
SSR1-208ENST00000483409 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
SSR1-208ENST00000483409 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
SSR1-208ENST00000483409 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
SSR1-208ENST00000483409 GRM8O00222 908 aa16.97■□□□□ 0.31
SSR1-208ENST00000483409 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
SSR1-208ENST00000483409 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
SSR1-208ENST00000483409 BRPF1P55201 1214 aaPredicted RBP16.96■□□□□ 0.31
SSR1-208ENST00000483409 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
SSR1-208ENST00000483409 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
SSR1-208ENST00000483409 PLA2G12BQ9BX93 195 aa16.96■□□□□ 0.31
SSR1-208ENST00000483409 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
SSR1-208ENST00000483409 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
SSR1-208ENST00000483409 PSMD1Q99460 953 aa16.95■□□□□ 0.3
SSR1-208ENST00000483409 GREM2Q9H772 168 aa16.95■□□□□ 0.3
SSR1-208ENST00000483409 LTBP1Q14766 1721 aa16.94■□□□□ 0.3
SSR1-208ENST00000483409 BCAR3O75815 825 aa16.94■□□□□ 0.3
SSR1-208ENST00000483409 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
SSR1-208ENST00000483409 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
SSR1-208ENST00000483409 GRIPAP1Q4V328 841 aa16.94■□□□□ 0.3
SSR1-208ENST00000483409 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
SSR1-208ENST00000483409 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
SSR1-208ENST00000483409 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SSR1-208ENST00000483409 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
SSR1-208ENST00000483409 FAM161AQ3B820 660 aa16.93■□□□□ 0.3
SSR1-208ENST00000483409 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
SSR1-208ENST00000483409 ANKRD18AQ8IVF6 992 aa16.93■□□□□ 0.3
SSR1-208ENST00000483409 MPNDQ8N594 471 aa16.93■□□□□ 0.3
SSR1-208ENST00000483409 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
SSR1-208ENST00000483409 COL4A5P29400 1685 aa16.93■□□□□ 0.3
SSR1-208ENST00000483409 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
SSR1-208ENST00000483409 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
SSR1-208ENST00000483409 FOXO4P98177 505 aa16.92■□□□□ 0.3
SSR1-208ENST00000483409 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
SSR1-208ENST00000483409 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
SSR1-208ENST00000483409 CSF1RP07333 972 aa16.91■□□□□ 0.3
SSR1-208ENST00000483409 ITGA6P23229 1130 aa16.91■□□□□ 0.3
SSR1-208ENST00000483409 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
SSR1-208ENST00000483409 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
SSR1-208ENST00000483409 CCT4P50991 539 aaKnown RBP16.9■□□□□ 0.3
SSR1-208ENST00000483409 GPSM2P81274 684 aa16.9■□□□□ 0.3
SSR1-208ENST00000483409 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
SSR1-208ENST00000483409 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
SSR1-208ENST00000483409 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
SSR1-208ENST00000483409 UTYO14607 1347 aa16.9■□□□□ 0.3
SSR1-208ENST00000483409 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
SSR1-208ENST00000483409 A0A1B0GUL6 1792 aa16.89■□□□□ 0.3
SSR1-208ENST00000483409 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 AOC3Q16853 763 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 ARHGAP45Q92619 1136 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
SSR1-208ENST00000483409 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 TNNQ9UQP3 1299 aa16.89■□□□□ 0.29
SSR1-208ENST00000483409 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
SSR1-208ENST00000483409 TRIM27P14373 513 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
SSR1-208ENST00000483409 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 IGHMBP2P38935 993 aaKnown RBP16.87■□□□□ 0.29
SSR1-208ENST00000483409 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
SSR1-208ENST00000483409 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 NIM1KQ8IY84 436 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
SSR1-208ENST00000483409 GPR101Q96P66 508 aaPredicted RBP16.87■□□□□ 0.29
SSR1-208ENST00000483409 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
SSR1-208ENST00000483409 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
SSR1-208ENST00000483409 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
SSR1-208ENST00000483409 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
SSR1-208ENST00000483409 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
SSR1-208ENST00000483409 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms