RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 KCNA3P22001 575 aa22.41■■□□□ 1.18
CPNE1-224ENST00000483359 KAZALD1Q96I82 304 aa22.41■■□□□ 1.18
CPNE1-224ENST00000483359 CHMP3Q9Y3E7 222 aa22.41■■□□□ 1.18
CPNE1-224ENST00000483359 MASTLQ96GX5 879 aa22.41■■□□□ 1.18
CPNE1-224ENST00000483359 BICC1Q9H694 974 aaKnown RBP22.41■■□□□ 1.18
CPNE1-224ENST00000483359 LRRFIP2Q9Y608 721 aaKnown RBP22.41■■□□□ 1.18
CPNE1-224ENST00000483359 FOXO4P98177 505 aa22.4■■□□□ 1.18
CPNE1-224ENST00000483359 PLA2G12BQ9BX93 195 aa22.4■■□□□ 1.18
CPNE1-224ENST00000483359 C1orf115Q9H7X2 142 aa22.4■■□□□ 1.18
CPNE1-224ENST00000483359 TAF1P21675 1872 aa22.4■■□□□ 1.18
CPNE1-224ENST00000483359 BRCA1P38398 1863 aaKnown RBP22.4■■□□□ 1.18
CPNE1-224ENST00000483359 GNAI3P08754 354 aa22.39■■□□□ 1.18
CPNE1-224ENST00000483359 NPR1P16066 1061 aa22.39■■□□□ 1.18
CPNE1-224ENST00000483359 TTLL11Q8NHH1 800 aa22.39■■□□□ 1.18
CPNE1-224ENST00000483359 COL4A1P02462 1669 aa22.39■■□□□ 1.17
CPNE1-224ENST00000483359 SF3B3Q15393 1217 aaKnown RBP22.39■■□□□ 1.17
CPNE1-224ENST00000483359 CCDC152Q4G0S7 254 aa22.39■■□□□ 1.17
CPNE1-224ENST00000483359 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.17
CPNE1-224ENST00000483359 GREM2Q9H772 168 aa22.39■■□□□ 1.17
CPNE1-224ENST00000483359 ZBTB7BO15156 539 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-224ENST00000483359 FAM161AQ3B820 660 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 DDX19BQ9UMR2 479 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-224ENST00000483359 SEC31BQ9NQW1 1179 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 PIM2Q9P1W9 311 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 PDZRN3Q9UPQ7 1066 aa22.38■■□□□ 1.17
CPNE1-224ENST00000483359 DDX46Q7L014 1031 aaKnown RBP22.37■■□□□ 1.17
CPNE1-224ENST00000483359 RBM17Q96I25 401 aaKnown RBP22.37■■□□□ 1.17
CPNE1-224ENST00000483359 BCS1LQ9Y276 419 aa22.37■■□□□ 1.17
CPNE1-224ENST00000483359 STYK1Q6J9G0 422 aa22.36■■□□□ 1.17
CPNE1-224ENST00000483359 CRBNQ96SW2 442 aa22.36■■□□□ 1.17
CPNE1-224ENST00000483359 ZNF219Q9P2Y4 722 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-224ENST00000483359 ANKRD44Q8N8A2 993 aa22.36■■□□□ 1.17
CPNE1-224ENST00000483359 GNAI2P04899 355 aa22.35■■□□□ 1.17
CPNE1-224ENST00000483359 HOXA10P31260 410 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-224ENST00000483359 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
CPNE1-224ENST00000483359 SLC51AQ86UW1 340 aa22.35■■□□□ 1.17
CPNE1-224ENST00000483359 TTLL6Q8N841 843 aa22.35■■□□□ 1.17
CPNE1-224ENST00000483359 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
CPNE1-224ENST00000483359 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
CPNE1-224ENST00000483359 CSF1RP07333 972 aa22.34■■□□□ 1.17
CPNE1-224ENST00000483359 ITGA6P23229 1130 aa22.34■■□□□ 1.17
CPNE1-224ENST00000483359 DALRD3Q5D0E6 543 aaKnown RBP22.34■■□□□ 1.17
CPNE1-224ENST00000483359 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
CPNE1-224ENST00000483359 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
CPNE1-224ENST00000483359 ALDH1B1P30837 517 aa22.33■■□□□ 1.17
CPNE1-224ENST00000483359 GRAPQ13588 217 aa22.32■■□□□ 1.16
CPNE1-224ENST00000483359 RABL6Q3YEC7 729 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-224ENST00000483359 GRAPLQ8TC17 118 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-224ENST00000483359 CRAMP1Q96RY5 1269 aa22.32■■□□□ 1.16
CPNE1-224ENST00000483359 HDAC5Q9UQL6 1122 aa22.32■■□□□ 1.16
CPNE1-224ENST00000483359 IFIT5Q13325 482 aaKnown RBP22.32■■□□□ 1.16
CPNE1-224ENST00000483359 PPEF1O14829 653 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-224ENST00000483359 CCDC57Q2TAC2 916 aa22.31■■□□□ 1.16
CPNE1-224ENST00000483359 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
CPNE1-224ENST00000483359 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
CPNE1-224ENST00000483359 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
CPNE1-224ENST00000483359 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
CPNE1-224ENST00000483359 C21orf2O43822 256 aa22.3■■□□□ 1.16
CPNE1-224ENST00000483359 YBX3P16989 372 aaKnown RBP eCLIP22.3■■□□□ 1.162e-6■■■■□ 21.8
CPNE1-224ENST00000483359 ZNF594Q96JF6 807 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-224ENST00000483359 GPR162Q16538 588 aa22.29■■□□□ 1.16
CPNE1-224ENST00000483359 TAF7LQ5H9L4 462 aa22.29■■□□□ 1.16
CPNE1-224ENST00000483359 ANKRD18AQ8IVF6 992 aa22.29■■□□□ 1.16
CPNE1-224ENST00000483359 KLHDC4Q8TBB5 520 aa22.29■■□□□ 1.16
CPNE1-224ENST00000483359 CDC5LQ99459 802 aaKnown RBP22.29■■□□□ 1.16
CPNE1-224ENST00000483359 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
CPNE1-224ENST00000483359 RPS8P62241 208 aaKnown RBP22.28■■□□□ 1.16
CPNE1-224ENST00000483359 CHMP4BQ9H444 224 aaKnown RBP22.28■■□□□ 1.16
CPNE1-224ENST00000483359 ARFGEF1Q9Y6D6 1849 aa22.27■■□□□ 1.16
CPNE1-224ENST00000483359 PNMA6EA0A0J9YXQ4 647 aa22.27■■□□□ 1.15
CPNE1-224ENST00000483359 IGHMBP2P38935 993 aaKnown RBP22.27■■□□□ 1.15
CPNE1-224ENST00000483359 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.15
CPNE1-224ENST00000483359 BBOX1O75936 387 aa22.26■■□□□ 1.15
CPNE1-224ENST00000483359 CEP85Q6P2H3 762 aa22.25■■□□□ 1.15
CPNE1-224ENST00000483359 MPHOSPH8Q99549 860 aa22.25■■□□□ 1.15
CPNE1-224ENST00000483359 MTX1Q13505 466 aa22.24■■□□□ 1.15
CPNE1-224ENST00000483359 C7orf43Q8WVR3 580 aa22.24■■□□□ 1.15
CPNE1-224ENST00000483359 PA2G4Q9UQ80 394 aaKnown RBP22.24■■□□□ 1.15
CPNE1-224ENST00000483359 ATP6V0A2Q9Y487 856 aa22.24■■□□□ 1.15
CPNE1-224ENST00000483359 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-224ENST00000483359 SIL1Q9H173 461 aa22.23■■□□□ 1.15
CPNE1-224ENST00000483359 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
CPNE1-224ENST00000483359 LDHAL6AQ6ZMR3 332 aa22.23■■□□□ 1.15
CPNE1-224ENST00000483359 PUS3Q9BZE2 481 aaKnown RBP22.23■■□□□ 1.15
CPNE1-224ENST00000483359 TMX4Q9H1E5 349 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-224ENST00000483359 CNNM1Q9NRU3 951 aa22.22■■□□□ 1.15
CPNE1-224ENST00000483359 BSDC1Q9NW68 430 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-224ENST00000483359 ATP8B2P98198 1209 aa22.21■■□□□ 1.15
CPNE1-224ENST00000483359 PTPN12Q05209 780 aaKnown RBP22.21■■□□□ 1.15
CPNE1-224ENST00000483359 CCDC93Q567U6 631 aa22.21■■□□□ 1.15
CPNE1-224ENST00000483359 SP8Q8IXZ3 490 aa22.21■■□□□ 1.15
CPNE1-224ENST00000483359 LRRC24Q50LG9 513 aa22.2■■□□□ 1.14
CPNE1-224ENST00000483359 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
CPNE1-224ENST00000483359 TMC4Q7Z404 712 aa22.2■■□□□ 1.14
CPNE1-224ENST00000483359 NSFL1CQ9UNZ2 370 aaKnown RBP22.2■■□□□ 1.14
CPNE1-224ENST00000483359 SIRT2Q8IXJ6 389 aa22.19■■□□□ 1.14
CPNE1-224ENST00000483359 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
CPNE1-224ENST00000483359 MINPP1Q9UNW1 487 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms