RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 PDE8AO60658 829 aa11.13□□□□□ -0.63
SNX4-205ENST00000482965 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
SNX4-205ENST00000482965 RASSF7Q02833 373 aa11.13□□□□□ -0.63
SNX4-205ENST00000482965 GCKRQ14397 625 aa11.13□□□□□ -0.63
SNX4-205ENST00000482965 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
SNX4-205ENST00000482965 UBE3BQ7Z3V4 1068 aa11.13□□□□□ -0.63
SNX4-205ENST00000482965 ABCC4O15439 1325 aa11.12□□□□□ -0.63
SNX4-205ENST00000482965 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
SNX4-205ENST00000482965 SF3B3Q15393 1217 aaKnown RBP11.12□□□□□ -0.63
SNX4-205ENST00000482965 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
SNX4-205ENST00000482965 SRCIN1Q9C0H9 1055 aa11.12□□□□□ -0.63
SNX4-205ENST00000482965 H7C1W4 665 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 NFKBIEO00221 500 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 ALDH1L1O75891 902 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
SNX4-205ENST00000482965 GRAPQ13588 217 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 GRAPLQ8TC17 118 aaPredicted RBP11.11□□□□□ -0.63
SNX4-205ENST00000482965 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 TMX4Q9H1E5 349 aaPredicted RBP11.11□□□□□ -0.63
SNX4-205ENST00000482965 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
SNX4-205ENST00000482965 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
SNX4-205ENST00000482965 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
SNX4-205ENST00000482965 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 BBOX1O75936 387 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 LMNB1P20700 586 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 CTSWP56202 376 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 RTKN2Q8IZC4 609 aa11.1□□□□□ -0.63
SNX4-205ENST00000482965 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
SNX4-205ENST00000482965 API5Q9BZZ5 524 aaKnown RBP11.1□□□□□ -0.63
SNX4-205ENST00000482965 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
SNX4-205ENST00000482965 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 SPEF2Q9C093 1822 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 GRM8O00222 908 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 CASP7P55210 303 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
SNX4-205ENST00000482965 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
SNX4-205ENST00000482965 BCAR3O75815 825 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX4-205ENST00000482965 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 SP8Q8IXZ3 490 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 FRAT1Q92837 279 aaPredicted RBP11.08□□□□□ -0.64
SNX4-205ENST00000482965 CELF1Q92879 486 aaKnown RBP11.08□□□□□ -0.64
SNX4-205ENST00000482965 SEC31BQ9NQW1 1179 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
SNX4-205ENST00000482965 GOLGB1Q14789 3259 aaKnown RBP11.08□□□□□ -0.64
SNX4-205ENST00000482965 LRRC37AA6NMS7 1700 aa11.07□□□□□ -0.64
SNX4-205ENST00000482965 CCT4P50991 539 aaKnown RBP11.07□□□□□ -0.64
SNX4-205ENST00000482965 PRELPP51888 382 aa11.07□□□□□ -0.64
SNX4-205ENST00000482965 RPS8P62241 208 aaKnown RBP11.07□□□□□ -0.64
SNX4-205ENST00000482965 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
SNX4-205ENST00000482965 ZNF784Q8NCA9 323 aaPredicted RBP11.07□□□□□ -0.64
SNX4-205ENST00000482965 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
SNX4-205ENST00000482965 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
SNX4-205ENST00000482965 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
SNX4-205ENST00000482965 COL4A1P02462 1669 aa11.07□□□□□ -0.64
SNX4-205ENST00000482965 RTL9Q8NET4 1388 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 ANKRD18AQ8IVF6 992 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 MPNDQ8N594 471 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 PSMD1Q99460 953 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 GREM2Q9H772 168 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
SNX4-205ENST00000482965 CHMP3Q9Y3E7 222 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
SNX4-205ENST00000482965 CSF1RP07333 972 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
SNX4-205ENST00000482965 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
SNX4-205ENST00000482965 FOXO4P98177 505 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 FAM161AQ3B820 660 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 DPP8Q6V1X1 898 aaPredicted RBP11.05□□□□□ -0.64
SNX4-205ENST00000482965 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 SUPT20HQ8NEM7 779 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
SNX4-205ENST00000482965 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 UTRNP46939 3433 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 UTYO14607 1347 aa11.05□□□□□ -0.64
SNX4-205ENST00000482965 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
SNX4-205ENST00000482965 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 TRIM27P14373 513 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 ITGA6P23229 1130 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 IGHMBP2P38935 993 aaKnown RBP11.04□□□□□ -0.64
SNX4-205ENST00000482965 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
SNX4-205ENST00000482965 EPHA10Q5JZY3 1008 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
SNX4-205ENST00000482965 NSFL1CQ9UNZ2 370 aaKnown RBP11.04□□□□□ -0.64
SNX4-205ENST00000482965 PPIP5K2O43314 1243 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 GPSM2P81274 684 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
SNX4-205ENST00000482965 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms