RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 PCCAP05165 728 aaPredicted RBP15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 RFC4P35249 363 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 MYH14Q7Z406 1995 aaKnown RBP15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 CNTNAP1P78357 1384 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 SURF6O75683 361 aaKnown RBP15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 ADRA2BP18089 450 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 MTX1Q13505 466 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 CLEC4GQ6UXB4 293 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 ARHGAP27Q6ZUM4 889 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 NLRP10Q86W26 655 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 WBP1LQ9NX94 342 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 NUP98P52948 1817 aa15.42■□□□□ 0.06
TSPAN1-208ENST00000482928 RGL2O15211 777 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 POLA2Q14181 598 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 UTP14AQ9BVJ6 771 aaKnown RBP15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 BCORQ6W2J9 1755 aa15.41■□□□□ 0.06
TSPAN1-208ENST00000482928 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
TSPAN1-208ENST00000482928 SKAP1Q86WV1 359 aa15.4■□□□□ 0.06
TSPAN1-208ENST00000482928 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
TSPAN1-208ENST00000482928 SCN7AQ01118 1682 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 NPHP1O15259 732 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 GTF2E1P29083 439 aaPredicted RBP15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 USPL1Q5W0Q7 1092 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 CDHR2Q9BYE9 1310 aa15.39■□□□□ 0.05
TSPAN1-208ENST00000482928 SSFA2P28290 1259 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 CASP7P55210 303 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 ARHGEF1Q92888 912 aaKnown RBP15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
TSPAN1-208ENST00000482928 IRS4O14654 1257 aaPredicted RBP15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 KIF1BPQ96EK5 621 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 SETDB2Q96T68 719 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
TSPAN1-208ENST00000482928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 SMARCA5O60264 1052 aaPredicted RBP15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 FOXO4P98177 505 aa15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
TSPAN1-208ENST00000482928 PDE8AO60658 829 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 PDE4AP27815 886 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 FLAD1Q8NFF5 587 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 SIL1Q9H173 461 aa15.35■□□□□ 0.05
TSPAN1-208ENST00000482928 ARFGEF1Q9Y6D6 1849 aa15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 CTSWP56202 376 aa15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 IFIT5Q13325 482 aaKnown RBP15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 CLASRPQ8N2M8 674 aaKnown RBP15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
TSPAN1-208ENST00000482928 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.05
TSPAN1-208ENST00000482928 ANKRD18BA2A2Z9 1011 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 VEGFBP49765 207 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 GPATCH3Q96I76 525 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 COPRSQ9NQ92 184 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 SBF1O95248 1867 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 BRCA1P38398 1863 aaKnown RBP15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.04
TSPAN1-208ENST00000482928 NTSR2O95665 410 aa15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 CCDC85AQ96PX6 553 aaPredicted RBP15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 IL1RAPL2Q9NP60 686 aa15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 CARMIL3Q8ND23 1372 aa15.32■□□□□ 0.04
TSPAN1-208ENST00000482928 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
TSPAN1-208ENST00000482928 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms