RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 KAZALD1Q96I82 304 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
CCDC78-213ENST00000482878 CDC37L1Q7L3B6 337 aa14.66□□□□□ -0.06
CCDC78-213ENST00000482878 ERC1Q8IUD2 1116 aa14.66□□□□□ -0.06
CCDC78-213ENST00000482878 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
CCDC78-213ENST00000482878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-213ENST00000482878 NPHP1O15259 732 aa14.66□□□□□ -0.06
CCDC78-213ENST00000482878 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-213ENST00000482878 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
CCDC78-213ENST00000482878 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-213ENST00000482878 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
CCDC78-213ENST00000482878 SLC27A2O14975 620 aa14.65□□□□□ -0.06
CCDC78-213ENST00000482878 KCNF1Q9H3M0 494 aa14.65□□□□□ -0.06
CCDC78-213ENST00000482878 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
CCDC78-213ENST00000482878 TNNT1P13805 278 aa14.65□□□□□ -0.06
CCDC78-213ENST00000482878 A0A0D9SFI3 127 aa14.65□□□□□ -0.06
CCDC78-213ENST00000482878 C1orf141Q5JVX7 400 aa14.65□□□□□ -0.06
CCDC78-213ENST00000482878 BICC1Q9H694 974 aaKnown RBP14.65□□□□□ -0.06
CCDC78-213ENST00000482878 RNMTO43148 476 aaKnown RBP14.64□□□□□ -0.07
CCDC78-213ENST00000482878 LIG1P18858 919 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 PTGS1P23219 599 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 CTIFO43310 598 aaKnown RBP14.64□□□□□ -0.07
CCDC78-213ENST00000482878 CAMK4Q16566 473 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 BOLA2Q9H3K6 86 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 TPM3P06753 285 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
CCDC78-213ENST00000482878 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
CCDC78-213ENST00000482878 KDM3BQ7LBC6 1761 aa14.63□□□□□ -0.07
CCDC78-213ENST00000482878 GRM8O00222 908 aa14.63□□□□□ -0.07
CCDC78-213ENST00000482878 KRT85P78386 507 aa14.63□□□□□ -0.07
CCDC78-213ENST00000482878 TPD52L1Q16890 204 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-213ENST00000482878 SIL1Q9H173 461 aa14.63□□□□□ -0.07
CCDC78-213ENST00000482878 HSPA2P54652 639 aa14.63□□□□□ -0.07
CCDC78-213ENST00000482878 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC78-213ENST00000482878 MYL6BP14649 208 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 KLHDC4Q8TBB5 520 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 PSMA5P28066 241 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 LINS1Q8NG48 757 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 KIF18AQ8NI77 898 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 PXDNQ92626 1479 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 USP54Q70EL1 1684 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 ZNF589Q86UQ0 364 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-213ENST00000482878 FSD1Q9BTV5 496 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 NFAT5O94916 1531 aa14.62□□□□□ -0.07
CCDC78-213ENST00000482878 NPHP4O75161 1426 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-213ENST00000482878 SMTNL1A8MU46 457 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 HIP1O00291 1037 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 TOB2Q14106 344 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-213ENST00000482878 NUP62CLQ9H1M0 184 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
CCDC78-213ENST00000482878 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 HEG1Q9ULI3 1381 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 MAP3K11Q16584 847 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
CCDC78-213ENST00000482878 ST7Q9NRC1 585 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 RPS6KB1P23443 525 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 STK3Q13188 491 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 LUZP1Q86V48 1076 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 FAM200AQ8TCP9 573 aa14.61□□□□□ -0.07
CCDC78-213ENST00000482878 EDC3Q96F86 508 aaKnown RBP14.61□□□□□ -0.07
CCDC78-213ENST00000482878 CAPN2P17655 700 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 TYRO3Q06418 890 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 DACT1Q9NYF0 836 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 UTYO14607 1347 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 ELP1O95163 1332 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 AMOTQ4VCS5 1084 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 MORC2Q9Y6X9 1032 aaPredicted RBP14.6□□□□□ -0.07
CCDC78-213ENST00000482878 LTN1O94822 1766 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 IGKV5-2P06315 115 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 PDCP20941 246 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 LRMPQ12912 555 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 KIF13AQ9H1H9 1805 aa14.6□□□□□ -0.07
CCDC78-213ENST00000482878 MED23Q9ULK4 1368 aa14.59□□□□□ -0.07
CCDC78-213ENST00000482878 RNF20Q5VTR2 975 aa14.59□□□□□ -0.07
CCDC78-213ENST00000482878 PDIA6Q15084 440 aa14.59□□□□□ -0.07
CCDC78-213ENST00000482878 ANKRD1Q15327 319 aa14.59□□□□□ -0.07
CCDC78-213ENST00000482878 KCNH5Q8NCM2 988 aa14.59□□□□□ -0.07
CCDC78-213ENST00000482878 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.07
CCDC78-213ENST00000482878 TNMDQ9H2S6 317 aa14.58□□□□□ -0.07
CCDC78-213ENST00000482878 ATF3P18847 181 aa14.58□□□□□ -0.08
CCDC78-213ENST00000482878 ZNF397Q8NF99 534 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-213ENST00000482878 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-213ENST00000482878 SPATA32Q96LK8 384 aa14.58□□□□□ -0.08
CCDC78-213ENST00000482878 ANO6Q4KMQ2 910 aa14.58□□□□□ -0.08
CCDC78-213ENST00000482878 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
CCDC78-213ENST00000482878 TSPYL1Q9H0U9 437 aa14.58□□□□□ -0.08
CCDC78-213ENST00000482878 TMX1Q9H3N1 280 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms