RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 TMOD3Q9NYL9 352 aa14.31□□□□□ -0.12
RAPGEF3-210ENST00000482843 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
RAPGEF3-210ENST00000482843 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
RAPGEF3-210ENST00000482843 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
RAPGEF3-210ENST00000482843 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
RAPGEF3-210ENST00000482843 STX6O43752 255 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 SYT1P21579 422 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 MSNP26038 577 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 HIP1O00291 1037 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 BRD1O95696 1058 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 IL2RBP14784 551 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 MTX1Q13505 466 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 TNNI3KQ59H18 835 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 FPGT-TNNI3KV9GXZ4 949 aa14.3□□□□□ -0.12
RAPGEF3-210ENST00000482843 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 ESPNB1AK53 854 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 CEBPZQ03701 1054 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 RBSNQ9H1K0 784 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 SPATA31A3Q5VYP0 1347 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 NFAT5O94916 1531 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 MBD3O95983 291 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 PSMA5P28066 241 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
RAPGEF3-210ENST00000482843 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 CYP2E1P05181 493 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 PTPN12Q05209 780 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 INTS4Q96HW7 963 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 TAF6LQ9Y6J9 622 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 LTN1O94822 1766 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 MEGF6O75095 1541 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 NBPF14Q5TI25 921 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-210ENST00000482843 SLC27A2O14975 620 aa14.27□□□□□ -0.12
RAPGEF3-210ENST00000482843 KDM4AO75164 1064 aa14.27□□□□□ -0.12
RAPGEF3-210ENST00000482843 DNM1Q05193 864 aaKnown RBP14.27□□□□□ -0.12
RAPGEF3-210ENST00000482843 CUL4AQ13619 759 aa14.27□□□□□ -0.12
RAPGEF3-210ENST00000482843 COL9A3Q14050 684 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF3-210ENST00000482843 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF3-210ENST00000482843 LRRC24Q50LG9 513 aa14.27□□□□□ -0.13
RAPGEF3-210ENST00000482843 CHST3Q7LGC8 479 aa14.27□□□□□ -0.13
RAPGEF3-210ENST00000482843 BTG4Q9NY30 223 aa14.27□□□□□ -0.13
RAPGEF3-210ENST00000482843 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.13
RAPGEF3-210ENST00000482843 H3BQV1 296 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ME3Q16798 604 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ASAP1Q9ULH1 1129 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 DNAJC10Q8IXB1 793 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 PUS3Q9BZE2 481 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 IFIT1P09914 478 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAPGEF3-210ENST00000482843 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 HAND2P61296 217 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 PXDNLA1KZ92 1463 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
RAPGEF3-210ENST00000482843 RAB11FIP4Q86YS3 637 aa14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 TSPY26PQ9H489 355 aa14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 CCT2P78371 535 aaKnown RBP14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 CCDC173Q0VFZ6 552 aa14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 CAMK4Q16566 473 aa14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
RAPGEF3-210ENST00000482843 TTC39AQ5SRH9 613 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 BRF1Q92994 677 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 F13A1P00488 732 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 COPRSQ9NQ92 184 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 CNNM1Q9NRU3 951 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 GUCY1B3Q02153 619 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
RAPGEF3-210ENST00000482843 MST1RQ04912 1400 aa14.22□□□□□ -0.13
RAPGEF3-210ENST00000482843 NECTIN1Q15223 517 aa14.22□□□□□ -0.13
RAPGEF3-210ENST00000482843 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
RAPGEF3-210ENST00000482843 STK11IPQ8N1F8 1099 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms