RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
TMEM54-206ENST00000482771 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
TMEM54-206ENST00000482771 KIAA2012Q0VF49 1180 aa16.86■□□□□ 0.29
TMEM54-206ENST00000482771 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
TMEM54-206ENST00000482771 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
TMEM54-206ENST00000482771 ZNF408Q9H9D4 720 aa16.86■□□□□ 0.29
TMEM54-206ENST00000482771 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
TMEM54-206ENST00000482771 RIPK4P57078 832 aa16.85■□□□□ 0.29
TMEM54-206ENST00000482771 CDC37L1Q7L3B6 337 aa16.85■□□□□ 0.29
TMEM54-206ENST00000482771 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
TMEM54-206ENST00000482771 ZC3H15Q8WU90 426 aaKnown RBP16.85■□□□□ 0.29
TMEM54-206ENST00000482771 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
TMEM54-206ENST00000482771 H7C1D1 291 aa16.84■□□□□ 0.29
TMEM54-206ENST00000482771 MLLT1Q03111 559 aaPredicted RBP16.84■□□□□ 0.29
TMEM54-206ENST00000482771 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
TMEM54-206ENST00000482771 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
TMEM54-206ENST00000482771 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
TMEM54-206ENST00000482771 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
TMEM54-206ENST00000482771 SHTN1A0MZ66 631 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 CA12O43570 354 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 RGS19P49795 217 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 GRAPQ13588 217 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 USP48Q86UV5 1035 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 GRAPLQ8TC17 118 aaPredicted RBP16.83■□□□□ 0.28
TMEM54-206ENST00000482771 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
TMEM54-206ENST00000482771 LAMB4A4D0S4 1761 aa16.82■□□□□ 0.28
TMEM54-206ENST00000482771 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
TMEM54-206ENST00000482771 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
TMEM54-206ENST00000482771 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
TMEM54-206ENST00000482771 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
TMEM54-206ENST00000482771 SH3TC1Q8TE82 1336 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 DLG5Q8TDM6 1919 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
TMEM54-206ENST00000482771 ZIC5Q96T25 663 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 MCOLN1Q9GZU1 580 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
TMEM54-206ENST00000482771 TRPM7Q96QT4 1865 aa16.81■□□□□ 0.28
TMEM54-206ENST00000482771 CDHR2Q9BYE9 1310 aa16.8■□□□□ 0.28
TMEM54-206ENST00000482771 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
TMEM54-206ENST00000482771 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
TMEM54-206ENST00000482771 RIMBP2O15034 1052 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 SLC34A2O95436 690 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
TMEM54-206ENST00000482771 HUNKP57058 714 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 DPF2Q92785 391 aa16.79■□□□□ 0.28
TMEM54-206ENST00000482771 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
TMEM54-206ENST00000482771 PSMD14O00487 310 aa16.78■□□□□ 0.28
TMEM54-206ENST00000482771 NOGQ13253 232 aa16.78■□□□□ 0.28
TMEM54-206ENST00000482771 DGKZQ13574 1117 aa16.78■□□□□ 0.28
TMEM54-206ENST00000482771 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
TMEM54-206ENST00000482771 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
TMEM54-206ENST00000482771 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
TMEM54-206ENST00000482771 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
TMEM54-206ENST00000482771 C6orf229H3BNL8 230 aa16.77■□□□□ 0.28
TMEM54-206ENST00000482771 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
TMEM54-206ENST00000482771 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
TMEM54-206ENST00000482771 CELF1Q92879 486 aaKnown RBP16.77■□□□□ 0.28
TMEM54-206ENST00000482771 FAM89AQ96GI7 184 aa16.77■□□□□ 0.28
TMEM54-206ENST00000482771 KCNQ5Q9NR82 932 aa16.77■□□□□ 0.28
TMEM54-206ENST00000482771 LAS1LQ9Y4W2 734 aaKnown RBP16.77■□□□□ 0.28
TMEM54-206ENST00000482771 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 CHL1O00533 1208 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 LMOD3Q0VAK6 560 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 ANKRD13DQ6ZTN6 518 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 KRT26Q7Z3Y9 468 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
TMEM54-206ENST00000482771 EGFRP00533 1210 aa16.75■□□□□ 0.27
TMEM54-206ENST00000482771 GPSM2P81274 684 aa16.75■□□□□ 0.27
TMEM54-206ENST00000482771 SF3B3Q15393 1217 aaKnown RBP16.75■□□□□ 0.27
TMEM54-206ENST00000482771 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
TMEM54-206ENST00000482771 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
TMEM54-206ENST00000482771 DCPSQ96C86 337 aaKnown RBP16.75■□□□□ 0.27
TMEM54-206ENST00000482771 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
TMEM54-206ENST00000482771 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
TMEM54-206ENST00000482771 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
TMEM54-206ENST00000482771 RGMBQ6NW40 437 aa16.74■□□□□ 0.27
TMEM54-206ENST00000482771 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
TMEM54-206ENST00000482771 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
TMEM54-206ENST00000482771 FAM155AB1AL88 458 aaPredicted RBP16.73■□□□□ 0.27
TMEM54-206ENST00000482771 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
TMEM54-206ENST00000482771 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
TMEM54-206ENST00000482771 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
TMEM54-206ENST00000482771 TAF1P21675 1872 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 ADM5C9JUS6 153 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 ECE2O60344 883 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 RPS12P25398 132 aaKnown RBP16.72■□□□□ 0.27
TMEM54-206ENST00000482771 ZNF157P51786 506 aaPredicted RBP16.72■□□□□ 0.27
TMEM54-206ENST00000482771 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 CCDC146Q8IYE0 955 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 EYA3Q99504 573 aa16.72■□□□□ 0.27
TMEM54-206ENST00000482771 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
TMEM54-206ENST00000482771 TBC1D16Q8TBP0 767 aa16.71■□□□□ 0.27
TMEM54-206ENST00000482771 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
TMEM54-206ENST00000482771 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
TMEM54-206ENST00000482771 G3V3G9 751 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms