RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 TCIRG1Q13488 830 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 RPGRQ92834 1020 aaKnown RBP10.07□□□□□ -0.8
CCNC-204ENST00000482541 CRAMP1Q96RY5 1269 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 UTP14AQ9BVJ6 771 aaKnown RBP10.07□□□□□ -0.8
CCNC-204ENST00000482541 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 IFT57Q9NWB7 429 aa10.07□□□□□ -0.8
CCNC-204ENST00000482541 ABCC12Q96J65 1359 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 PLBD2Q8NHP8 589 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 HYPKQ9NX55 129 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 CHPF2Q9P2E5 772 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 TIAM2Q8IVF5 1701 aa10.06□□□□□ -0.8
CCNC-204ENST00000482541 SMC1BQ8NDV3 1235 aa10.05□□□□□ -0.8
CCNC-204ENST00000482541 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
CCNC-204ENST00000482541 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
CCNC-204ENST00000482541 PSMD1Q99460 953 aa10.05□□□□□ -0.8
CCNC-204ENST00000482541 POTECB2RU33 542 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 NLRP10Q86W26 655 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 ANP32CO43423 234 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 DDNO94850 711 aaPredicted RBP10.04□□□□□ -0.8
CCNC-204ENST00000482541 NBR1Q14596 966 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
CCNC-204ENST00000482541 IARSP41252 1262 aaKnown RBP10.03□□□□□ -0.8
CCNC-204ENST00000482541 OLFM4Q6UX06 510 aa10.03□□□□□ -0.8
CCNC-204ENST00000482541 EFCAB3Q8N7B9 438 aa10.03□□□□□ -0.8
CCNC-204ENST00000482541 TMX4Q9H1E5 349 aaPredicted RBP10.03□□□□□ -0.8
CCNC-204ENST00000482541 ZNF277Q9NRM2 450 aaPredicted RBP10.03□□□□□ -0.8
CCNC-204ENST00000482541 TRMT112Q9UI30 125 aaKnown RBP10.03□□□□□ -0.8
CCNC-204ENST00000482541 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
CCNC-204ENST00000482541 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
CCNC-204ENST00000482541 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 FZD9O00144 591 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 BBOX1O75936 387 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 TRIM28Q13263 835 aaKnown RBP10.02□□□□□ -0.8
CCNC-204ENST00000482541 DNAJC5GQ8N7S2 189 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 JDP2Q8WYK2 163 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.8
CCNC-204ENST00000482541 ISCA1Q9BUE6 129 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 VPS33BQ9H267 617 aa10.02□□□□□ -0.8
CCNC-204ENST00000482541 SNED1Q8TER0 1413 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 ELL2O00472 640 aaPredicted RBP10.02□□□□□ -0.81
CCNC-204ENST00000482541 PPEF1O14829 653 aaPredicted RBP10.02□□□□□ -0.81
CCNC-204ENST00000482541 CCDC30Q5VVM6 783 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 MRS2Q9HD23 443 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 ATP6V0A2Q9Y487 856 aa10.02□□□□□ -0.81
CCNC-204ENST00000482541 RIC3Q7Z5B4 369 aa10.01□□□□□ -0.81
CCNC-204ENST00000482541 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
CCNC-204ENST00000482541 SP8Q8IXZ3 490 aa10.01□□□□□ -0.81
CCNC-204ENST00000482541 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
CCNC-204ENST00000482541 GOLGA2Q08379 1002 aa10□□□□□ -0.81
CCNC-204ENST00000482541 DDX46Q7L014 1031 aaKnown RBP10□□□□□ -0.81
CCNC-204ENST00000482541 GPC2Q8N158 579 aa10□□□□□ -0.81
CCNC-204ENST00000482541 SCN4AP35499 1836 aa10□□□□□ -0.81
CCNC-204ENST00000482541 ATP5J2-PTCD1G3V325 749 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 HSP90B1P14625 803 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 SF3B3Q15393 1217 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 TPRNQ4KMQ1 711 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 FAM89AQ96GI7 184 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 RTFDC1Q9BY42 306 aaPredicted RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 PHAXQ9H814 394 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 ABCC4O15439 1325 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 IL16Q14005 1332 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 DDX58O95786 925 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 EIF6P56537 245 aaKnown RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 GRAPQ13588 217 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 TSPYL6Q8N831 410 aa9.99□□□□□ -0.81
CCNC-204ENST00000482541 GRAPLQ8TC17 118 aaPredicted RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 TAF1DQ9H5J8 278 aaPredicted RBP9.99□□□□□ -0.81
CCNC-204ENST00000482541 ZNF541Q9H0D2 1346 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 PNMA8AQ86V59 439 aaPredicted RBP9.98□□□□□ -0.81
CCNC-204ENST00000482541 MPNDQ8N594 471 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
CCNC-204ENST00000482541 CCDC191Q8NCU4 936 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 HACL1Q9UJ83 578 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 LAMB2P55268 1798 aa9.98□□□□□ -0.81
CCNC-204ENST00000482541 IRS4O14654 1257 aaPredicted RBP9.97□□□□□ -0.81
CCNC-204ENST00000482541 PPP1R37O75864 691 aa9.97□□□□□ -0.81
CCNC-204ENST00000482541 DPP8Q6V1X1 898 aaPredicted RBP9.97□□□□□ -0.81
CCNC-204ENST00000482541 LDHDQ86WU2 507 aa9.97□□□□□ -0.81
CCNC-204ENST00000482541 WDR63Q8IWG1 891 aa9.97□□□□□ -0.81
CCNC-204ENST00000482541 NIM1KQ8IY84 436 aa9.97□□□□□ -0.81
CCNC-204ENST00000482541 TSR2Q969E8 191 aaKnown RBP9.97□□□□□ -0.81
CCNC-204ENST00000482541 KLRG1Q96E93 195 aa9.97□□□□□ -0.81
CCNC-204ENST00000482541 METTL22Q9BUU2 404 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms