RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 SF3B3Q15393 1217 aaKnown RBP21.15■□□□□ 0.98
VAMP4-204ENST00000482519 SP8Q8IXZ3 490 aa21.15■□□□□ 0.98
VAMP4-204ENST00000482519 MIER1Q8N108 512 aa21.15■□□□□ 0.98
VAMP4-204ENST00000482519 CCDC85AQ96PX6 553 aaPredicted RBP21.15■□□□□ 0.98
VAMP4-204ENST00000482519 E9PSI1 815 aa21.14■□□□□ 0.97
VAMP4-204ENST00000482519 DDNO94850 711 aaPredicted RBP21.14■□□□□ 0.97
VAMP4-204ENST00000482519 VEGFAP15692 232 aaPredicted RBP21.14■□□□□ 0.97
VAMP4-204ENST00000482519 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
VAMP4-204ENST00000482519 SNED1Q8TER0 1413 aa21.13■□□□□ 0.97
VAMP4-204ENST00000482519 NEURL1BA8MQ27 555 aa21.13■□□□□ 0.97
VAMP4-204ENST00000482519 DPP8Q6V1X1 898 aaPredicted RBP21.13■□□□□ 0.97
VAMP4-204ENST00000482519 LARGE2Q8N3Y3 721 aa21.13■□□□□ 0.97
VAMP4-204ENST00000482519 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
VAMP4-204ENST00000482519 CELF1Q92879 486 aaKnown RBP21.13■□□□□ 0.97
VAMP4-204ENST00000482519 PDE8AO60658 829 aa21.12■□□□□ 0.97
VAMP4-204ENST00000482519 MPNDQ8N594 471 aa21.12■□□□□ 0.97
VAMP4-204ENST00000482519 CDCA7LQ96GN5 454 aa21.12■□□□□ 0.97
VAMP4-204ENST00000482519 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
VAMP4-204ENST00000482519 F6X3S4 739 aa21.11■□□□□ 0.97
VAMP4-204ENST00000482519 SLFN5Q08AF3 891 aa21.11■□□□□ 0.97
VAMP4-204ENST00000482519 CCDC152Q4G0S7 254 aa21.11■□□□□ 0.97
VAMP4-204ENST00000482519 UBE3BQ7Z3V4 1068 aa21.11■□□□□ 0.97
VAMP4-204ENST00000482519 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
VAMP4-204ENST00000482519 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
VAMP4-204ENST00000482519 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
VAMP4-204ENST00000482519 SEC31BQ9NQW1 1179 aa21.1■□□□□ 0.97
VAMP4-204ENST00000482519 RPS8P62241 208 aaKnown RBP21.09■□□□□ 0.97
VAMP4-204ENST00000482519 GCKRQ14397 625 aa21.09■□□□□ 0.97
VAMP4-204ENST00000482519 AOC3Q16853 763 aa21.09■□□□□ 0.97
VAMP4-204ENST00000482519 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
VAMP4-204ENST00000482519 LINS1Q8NG48 757 aa21.09■□□□□ 0.97
VAMP4-204ENST00000482519 CDHR2Q9BYE9 1310 aa21.08■□□□□ 0.97
VAMP4-204ENST00000482519 POTECB2RU33 542 aa21.08■□□□□ 0.97
VAMP4-204ENST00000482519 FZD9O00144 591 aa21.08■□□□□ 0.97
VAMP4-204ENST00000482519 EIF6P56537 245 aaKnown RBP21.08■□□□□ 0.97
VAMP4-204ENST00000482519 NIM1KQ8IY84 436 aa21.08■□□□□ 0.97
VAMP4-204ENST00000482519 WDR90Q96KV7 1748 aa21.08■□□□□ 0.97
VAMP4-204ENST00000482519 NSFL1CQ9UNZ2 370 aaKnown RBP21.08■□□□□ 0.97
VAMP4-204ENST00000482519 H7C1W4 665 aa21.07■□□□□ 0.96
VAMP4-204ENST00000482519 CTSWP56202 376 aa21.07■□□□□ 0.96
VAMP4-204ENST00000482519 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
VAMP4-204ENST00000482519 GJA3Q9Y6H8 435 aa21.07■□□□□ 0.96
VAMP4-204ENST00000482519 COL4A1P02462 1669 aa21.07■□□□□ 0.96
VAMP4-204ENST00000482519 COL4A5P29400 1685 aa21.06■□□□□ 0.96
VAMP4-204ENST00000482519 HSPA6P17066 643 aa21.06■□□□□ 0.96
VAMP4-204ENST00000482519 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
VAMP4-204ENST00000482519 GPSM2P81274 684 aa21.05■□□□□ 0.96
VAMP4-204ENST00000482519 IQCA1LA6NCM1 817 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 C6orf229H3BNL8 230 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 ANKRD18AQ8IVF6 992 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 GPC2Q8N158 579 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 SMC1BQ8NDV3 1235 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 TTLL11Q8NHH1 800 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 BCL2L13Q9BXK5 485 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 MYH3P11055 1940 aa21.04■□□□□ 0.96
VAMP4-204ENST00000482519 FSTL1Q12841 308 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 MRPL50Q8N5N7 158 aaKnown RBP21.03■□□□□ 0.96
VAMP4-204ENST00000482519 SSH1Q8WYL5 1049 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 L3MBTL3Q96JM7 780 aaPredicted RBP21.03■□□□□ 0.96
VAMP4-204ENST00000482519 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 GREM2Q9H772 168 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 ANKIB1Q9P2G1 1089 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 LRRC37AA6NMS7 1700 aa21.03■□□□□ 0.96
VAMP4-204ENST00000482519 RIMBP2O15034 1052 aa21.02■□□□□ 0.96
VAMP4-204ENST00000482519 KIAA2012Q0VF49 1180 aa21.02■□□□□ 0.96
VAMP4-204ENST00000482519 CDC5LQ99459 802 aaKnown RBP21.02■□□□□ 0.96
VAMP4-204ENST00000482519 ZNRF3Q9ULT6 936 aa21.02■□□□□ 0.96
VAMP4-204ENST00000482519 WASHC4Q2M389 1173 aa21.01■□□□□ 0.95
VAMP4-204ENST00000482519 EAPPQ56P03 285 aaPredicted RBP21.01■□□□□ 0.95
VAMP4-204ENST00000482519 POLLQ9UGP5 575 aa21.01■□□□□ 0.95
VAMP4-204ENST00000482519 HACL1Q9UJ83 578 aa21.01■□□□□ 0.95
VAMP4-204ENST00000482519 TRMT2AQ8IZ69 625 aaKnown RBP21■□□□□ 0.95
VAMP4-204ENST00000482519 GPR101Q96P66 508 aaPredicted RBP21■□□□□ 0.95
VAMP4-204ENST00000482519 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
VAMP4-204ENST00000482519 TAF1DQ9H5J8 278 aaPredicted RBP21■□□□□ 0.95
VAMP4-204ENST00000482519 C9orf78Q9NZ63 289 aaPredicted RBP21■□□□□ 0.95
VAMP4-204ENST00000482519 SCN4AP35499 1836 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 DUOX1Q9NRD9 1551 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 POTEIP0CG38 1075 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 POTEJP0CG39 1038 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 CASP7P55210 303 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 TBC1D16Q8TBP0 767 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 SMC4Q9NTJ3 1288 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 SPEF2Q9C093 1822 aa20.99■□□□□ 0.95
VAMP4-204ENST00000482519 GRM8O00222 908 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 RAD17O75943 681 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 UFL1O94874 794 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 LMOD1P29536 600 aaPredicted RBP20.98■□□□□ 0.95
VAMP4-204ENST00000482519 EPHX2P34913 555 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 CXCL9Q07325 125 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 EYA3Q99504 573 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 PLA2G12BQ9BX93 195 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 CLEC11AQ9Y240 323 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 CHMP3Q9Y3E7 222 aa20.98■□□□□ 0.95
VAMP4-204ENST00000482519 ALDH1L1O75891 902 aa20.97■□□□□ 0.95
VAMP4-204ENST00000482519 ITGA6P23229 1130 aa20.97■□□□□ 0.95
VAMP4-204ENST00000482519 IGHMBP2P38935 993 aaKnown RBP20.97■□□□□ 0.95
VAMP4-204ENST00000482519 APLP1P51693 650 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms