RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 CSF1RP07333 972 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 HCLS1P14317 486 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 NFIXQ14938 502 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 ERFEQ4G0M1 354 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 TTLL11Q8NHH1 800 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 CCDC85AQ96PX6 553 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 BCL11AQ9H165 835 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 SIL1Q9H173 461 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
ERGIC3-214ENST00000482338 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 SASH1O94885 1247 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 OTUD7AQ8TE49 926 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 NYXQ9GZU5 481 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 GREM2Q9H772 168 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 IL1RAPL2Q9NP60 686 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 DLEC1Q9Y238 1755 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 LRRC37AA6NMS7 1700 aa10.89□□□□□ -0.67
ERGIC3-214ENST00000482338 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 SLC15A2Q16348 729 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 RIC1Q4ADV7 1423 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 ERC1Q8IUD2 1116 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 FLAD1Q8NFF5 587 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 AKAP11Q9UKA4 1901 aa10.88□□□□□ -0.67
ERGIC3-214ENST00000482338 ITGA6P23229 1130 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 TM4SF1P30408 202 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 ATG9AQ7Z3C6 839 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
ERGIC3-214ENST00000482338 ZNF609O15014 1411 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 MSH5O43196 834 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 HSP90B1P14625 803 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 GTF2E1P29083 439 aaPredicted RBP10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 DDR1Q08345 913 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 IFIT5Q13325 482 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 SLC10A5Q5PT55 438 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 CCDC125Q86Z20 511 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 CCDC24Q8N4L8 307 aa10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 PUS3Q9BZE2 481 aaKnown RBP10.86□□□□□ -0.67
ERGIC3-214ENST00000482338 EYA2O00167 538 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 CIAO1O76071 339 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 PDE1AP54750 535 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 TFCP2Q12800 502 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 CCDC152Q4G0S7 254 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 TPTE2Q6XPS3 522 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
ERGIC3-214ENST00000482338 LTBP1Q14766 1721 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 KIAA1551Q9HCM1 1747 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 DOCK2Q92608 1830 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 NPHP1O15259 732 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 SERPINB2P05120 415 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 MX1P20591 662 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 IL15P40933 162 aaPredicted RBP10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 SF3B3Q15393 1217 aaKnown RBP10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 C8orf34Q49A92 452 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 TSHZ3Q63HK5 1081 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 CLASRPQ8N2M8 674 aaKnown RBP10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 EAF2Q96CJ1 260 aaPredicted RBP10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 OSBPL3Q9H4L5 887 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 SEC31BQ9NQW1 1179 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
ERGIC3-214ENST00000482338 TNNI3KQ59H18 835 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 AACSQ86V21 672 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 NLGN1Q8N2Q7 840 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 TLR7Q9NYK1 1049 aaKnown RBP10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 FPGT-TNNI3KV9GXZ4 949 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 AOX1Q06278 1338 aa10.83□□□□□ -0.68
ERGIC3-214ENST00000482338 ST5P78524 1137 aa10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 BMP2KLQ5H9B9 411 aa10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 PI4K2BQ8TCG2 481 aa10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
ERGIC3-214ENST00000482338 PDGFDQ9GZP0 370 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms