RNA–Protein interactions for RNA: ENST00000481997.5

ARPC1B-217, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 945 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-217ENST00000481997 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
ARPC1B-217ENST00000481997 SUSD4Q5VX71 490 aa18.58■□□□□ 0.56
ARPC1B-217ENST00000481997 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
ARPC1B-217ENST00000481997 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
ARPC1B-217ENST00000481997 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
ARPC1B-217ENST00000481997 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 PDE4AP27815 886 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 FOXO4P98177 505 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 FLAD1Q8NFF5 587 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 LAMB2P55268 1798 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
ARPC1B-217ENST00000481997 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
ARPC1B-217ENST00000481997 NUCB1Q02818 461 aa18.56■□□□□ 0.56
ARPC1B-217ENST00000481997 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
ARPC1B-217ENST00000481997 IRS4O14654 1257 aaPredicted RBP18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 NTSR2O95665 410 aa18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 ANP32AP39687 249 aaKnown RBP18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
ARPC1B-217ENST00000481997 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
ARPC1B-217ENST00000481997 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
ARPC1B-217ENST00000481997 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
ARPC1B-217ENST00000481997 SYNE4Q8N205 404 aa18.54■□□□□ 0.56
ARPC1B-217ENST00000481997 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 GYS1P13807 737 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 HSP90AB4PQ58FF6 505 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 NYXQ9GZU5 481 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 EXOC6BQ9Y2D4 811 aa18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
ARPC1B-217ENST00000481997 WDR90Q96KV7 1748 aa18.52■□□□□ 0.56
ARPC1B-217ENST00000481997 PDE8AO60658 829 aa18.52■□□□□ 0.56
ARPC1B-217ENST00000481997 RAB11FIP3O75154 756 aa18.52■□□□□ 0.56
ARPC1B-217ENST00000481997 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
ARPC1B-217ENST00000481997 ZBTB47Q9UFB7 747 aaPredicted RBP18.52■□□□□ 0.56
ARPC1B-217ENST00000481997 PNPLA7Q6ZV29 1317 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 CSF1RP07333 972 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 CTSWP56202 376 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 HTRA3P83110 453 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 NFIXQ14938 502 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
ARPC1B-217ENST00000481997 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
ARPC1B-217ENST00000481997 NUTM1Q86Y26 1132 aa18.5■□□□□ 0.55
ARPC1B-217ENST00000481997 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
ARPC1B-217ENST00000481997 COPRSQ9NQ92 184 aa18.5■□□□□ 0.55
ARPC1B-217ENST00000481997 APBB1O00213 710 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 MSH5O43196 834 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 TTLL11Q8NHH1 800 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 LRRCC1Q9C099 1032 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 CD2APQ9Y5K6 639 aa18.49■□□□□ 0.55
ARPC1B-217ENST00000481997 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 RGS3P49796 1198 aa18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 G3BP1Q13283 466 aaKnown RBP eCLIP18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 NLGN1Q8N2Q7 840 aa18.48■□□□□ 0.55
ARPC1B-217ENST00000481997 TM4SF1P30408 202 aa18.47■□□□□ 0.55
ARPC1B-217ENST00000481997 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
ARPC1B-217ENST00000481997 CCDC57Q2TAC2 916 aa18.47■□□□□ 0.55
ARPC1B-217ENST00000481997 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
ARPC1B-217ENST00000481997 KIF1BPQ96EK5 621 aa18.47■□□□□ 0.55
ARPC1B-217ENST00000481997 SMARCA5O60264 1052 aaPredicted RBP18.46■□□□□ 0.55
ARPC1B-217ENST00000481997 EIF5BO60841 1220 aaKnown RBP18.46■□□□□ 0.55
ARPC1B-217ENST00000481997 IFIT5Q13325 482 aaKnown RBP18.46■□□□□ 0.55
ARPC1B-217ENST00000481997 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
ARPC1B-217ENST00000481997 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
ARPC1B-217ENST00000481997 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 HSPA1AP0DMV8 641 aaKnown RBP18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 HSPA1BP0DMV9 641 aaKnown RBP18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 CNBD1Q8NA66 436 aa18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 SIL1Q9H173 461 aa18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 GREM2Q9H772 168 aa18.45■□□□□ 0.54
ARPC1B-217ENST00000481997 RTL9Q8NET4 1388 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 NPHP1O15259 732 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 SERPINB2P05120 415 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 ITGA6P23229 1130 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 CCDC152Q4G0S7 254 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
ARPC1B-217ENST00000481997 RIC1Q4ADV7 1423 aa18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 POLRMTO00411 1230 aaKnown RBP18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 CIAO1O76071 339 aa18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 DDR1Q08345 913 aa18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
ARPC1B-217ENST00000481997 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms