RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 LRP5O75197 1615 aa14.8□□□□□ -0.04
SNRNP25-206ENST00000481947 GTF2E1P29083 439 aaPredicted RBP14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 NUCB1Q02818 461 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 FAM161AQ3B820 660 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 CNBD1Q8NA66 436 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 RTL9Q8NET4 1388 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 SLC16A10Q8TF71 515 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 COPRSQ9NQ92 184 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 CHMP3Q9Y3E7 222 aa14.79□□□□□ -0.04
SNRNP25-206ENST00000481947 SPEF2Q9C093 1822 aa14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 SURF6O75683 361 aaKnown RBP14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 MMP10P09238 476 aa14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 SF3B3Q15393 1217 aaKnown RBP14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 GREM2Q9H772 168 aa14.78□□□□□ -0.04
SNRNP25-206ENST00000481947 COL4A1P02462 1669 aa14.77□□□□□ -0.04
SNRNP25-206ENST00000481947 RAB11FIP3O75154 756 aa14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 ITGA6P23229 1130 aa14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 CCDC57Q2TAC2 916 aa14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 CCDC24Q8N4L8 307 aa14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.05
SNRNP25-206ENST00000481947 TAF1P21675 1872 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 ST5P78524 1137 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 CCDC152Q4G0S7 254 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 ANKRD45Q5TZF3 282 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 SKAP1Q86WV1 359 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 ZNF594Q96JF6 807 aaPredicted RBP14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 NLRP3Q96P20 1036 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 PARP3Q9Y6F1 533 aa14.76□□□□□ -0.05
SNRNP25-206ENST00000481947 ANKRD18BA2A2Z9 1011 aa14.75□□□□□ -0.05
SNRNP25-206ENST00000481947 NPHP1O15259 732 aa14.75□□□□□ -0.05
SNRNP25-206ENST00000481947 SIL1Q9H173 461 aa14.75□□□□□ -0.05
SNRNP25-206ENST00000481947 APBB1O00213 710 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 SASH1O94885 1247 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 PDE4AP27815 886 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 ATG9AQ7Z3C6 839 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 ERC1Q8IUD2 1116 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 RHPN1Q8TCX5 695 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 LRRCC1Q9C099 1032 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 LNPKQ9C0E8 428 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 SEC31BQ9NQW1 1179 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 A0A1B0GUL6 1792 aa14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 COL11A2P13942 1736 aaPredicted RBP14.74□□□□□ -0.05
SNRNP25-206ENST00000481947 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 EYA2O00167 538 aa14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 SMARCA5O60264 1052 aaPredicted RBP14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 CIAO1O76071 339 aa14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 CRY2Q49AN0 593 aa14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 PUS3Q9BZE2 481 aaKnown RBP14.73□□□□□ -0.05
SNRNP25-206ENST00000481947 KIF13BQ9NQT8 1826 aa14.72□□□□□ -0.05
SNRNP25-206ENST00000481947 LRRC24Q50LG9 513 aa14.72□□□□□ -0.05
SNRNP25-206ENST00000481947 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
SNRNP25-206ENST00000481947 BRIP1Q9BX63 1249 aa14.72□□□□□ -0.05
SNRNP25-206ENST00000481947 IL15P40933 162 aaPredicted RBP14.71□□□□□ -0.05
SNRNP25-206ENST00000481947 CDC5LQ99459 802 aaKnown RBP14.71□□□□□ -0.05
SNRNP25-206ENST00000481947 MTFR1LQ9H019 292 aa14.71□□□□□ -0.05
SNRNP25-206ENST00000481947 RIPOR2Q9Y4F9 1068 aa14.71□□□□□ -0.05
SNRNP25-206ENST00000481947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.05
SNRNP25-206ENST00000481947 SALL3Q9BXA9 1300 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 C10orf71Q711Q0 1435 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 ZBTB7AO95365 584 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 TFCP2Q12800 502 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 LDHAL6AQ6ZMR3 332 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 C16orf71Q8IYS4 520 aaPredicted RBP14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 IL1RAPL2Q9NP60 686 aa14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 ZBTB47Q9UFB7 747 aaPredicted RBP14.7□□□□□ -0.06
SNRNP25-206ENST00000481947 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 HOXA10P31260 410 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 RGS3P49796 1198 aa14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 DDX46Q7L014 1031 aaKnown RBP14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 DLEC1Q9Y238 1755 aa14.69□□□□□ -0.06
SNRNP25-206ENST00000481947 PDE6BP35913 854 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 ANKRD18AQ8IVF6 992 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 PLEKHM2Q8IWE5 1019 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 OTUD7AQ8TE49 926 aaPredicted RBP14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 RPGRQ92834 1020 aaKnown RBP14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 LRRC37AA6NMS7 1700 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 ARAP2Q8WZ64 1704 aa14.68□□□□□ -0.06
SNRNP25-206ENST00000481947 ZNF609O15014 1411 aa14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 KIAA1551Q9HCM1 1747 aa14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 RPS8P62241 208 aaKnown RBP14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 GRAPQ13588 217 aa14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 VGLL2Q8N8G2 317 aa14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 GRAPLQ8TC17 118 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-206ENST00000481947 RBM17Q96I25 401 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms