RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 SLFN5Q08AF3 891 aa23.91■■□□□ 1.42
HSPG2-210ENST00000481644 CWF19L2Q2TBE0 894 aaKnown RBP23.91■■□□□ 1.42
HSPG2-210ENST00000481644 DNAAF4Q8WXU2 420 aa23.91■■□□□ 1.42
HSPG2-210ENST00000481644 RRAGCQ9HB90 399 aa23.91■■□□□ 1.42
HSPG2-210ENST00000481644 NEURL1BA8MQ27 555 aa23.9■■□□□ 1.42
HSPG2-210ENST00000481644 CDHR2Q9BYE9 1310 aa23.89■■□□□ 1.42
HSPG2-210ENST00000481644 PDE8AO60658 829 aa23.89■■□□□ 1.41
HSPG2-210ENST00000481644 TMC4Q7Z404 712 aa23.89■■□□□ 1.41
HSPG2-210ENST00000481644 SP8Q8IXZ3 490 aa23.89■■□□□ 1.41
HSPG2-210ENST00000481644 CDCA7LQ96GN5 454 aa23.89■■□□□ 1.41
HSPG2-210ENST00000481644 MYH3P11055 1940 aa23.88■■□□□ 1.41
HSPG2-210ENST00000481644 LRRC37AA6NMS7 1700 aa23.88■■□□□ 1.41
HSPG2-210ENST00000481644 WDR90Q96KV7 1748 aa23.88■■□□□ 1.41
HSPG2-210ENST00000481644 C16orf71Q8IYS4 520 aaPredicted RBP23.88■■□□□ 1.41
HSPG2-210ENST00000481644 TOMM70O94826 608 aa23.87■■□□□ 1.41
HSPG2-210ENST00000481644 CCDC152Q4G0S7 254 aa23.87■■□□□ 1.41
HSPG2-210ENST00000481644 LINS1Q8NG48 757 aa23.87■■□□□ 1.41
HSPG2-210ENST00000481644 CELF1Q92879 486 aaKnown RBP23.87■■□□□ 1.41
HSPG2-210ENST00000481644 COL4A1P02462 1669 aa23.86■■□□□ 1.41
HSPG2-210ENST00000481644 F6X3S4 739 aa23.86■■□□□ 1.41
HSPG2-210ENST00000481644 GCKRQ14397 625 aa23.86■■□□□ 1.41
HSPG2-210ENST00000481644 DPP8Q6V1X1 898 aaPredicted RBP23.86■■□□□ 1.41
HSPG2-210ENST00000481644 JDP2Q8WYK2 163 aa23.86■■□□□ 1.41
HSPG2-210ENST00000481644 VEGFAP15692 232 aaPredicted RBP23.85■■□□□ 1.41
HSPG2-210ENST00000481644 MPNDQ8N594 471 aa23.85■■□□□ 1.41
HSPG2-210ENST00000481644 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
HSPG2-210ENST00000481644 COL4A5P29400 1685 aa23.84■■□□□ 1.41
HSPG2-210ENST00000481644 DDNO94850 711 aaPredicted RBP23.84■■□□□ 1.41
HSPG2-210ENST00000481644 UBE3BQ7Z3V4 1068 aa23.84■■□□□ 1.41
HSPG2-210ENST00000481644 LARGE2Q8N3Y3 721 aa23.84■■□□□ 1.41
HSPG2-210ENST00000481644 CCDC85AQ96PX6 553 aaPredicted RBP23.84■■□□□ 1.41
HSPG2-210ENST00000481644 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
HSPG2-210ENST00000481644 H7C1W4 665 aa23.83■■□□□ 1.41
HSPG2-210ENST00000481644 CTSWP56202 376 aa23.83■■□□□ 1.41
HSPG2-210ENST00000481644 RPS8P62241 208 aaKnown RBP23.83■■□□□ 1.41
HSPG2-210ENST00000481644 RTFDC1Q9BY42 306 aaPredicted RBP23.83■■□□□ 1.41
HSPG2-210ENST00000481644 SEC31BQ9NQW1 1179 aa23.83■■□□□ 1.41
HSPG2-210ENST00000481644 FZD9O00144 591 aa23.82■■□□□ 1.4
HSPG2-210ENST00000481644 PPIP5K2O43314 1243 aa23.82■■□□□ 1.4
HSPG2-210ENST00000481644 TRMT2AQ8IZ69 625 aaKnown RBP23.82■■□□□ 1.4
HSPG2-210ENST00000481644 AOC3Q16853 763 aa23.81■■□□□ 1.4
HSPG2-210ENST00000481644 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
HSPG2-210ENST00000481644 MRPL50Q8N5N7 158 aaKnown RBP23.81■■□□□ 1.4
HSPG2-210ENST00000481644 RBM46Q8TBY0 533 aaKnown RBP23.81■■□□□ 1.4
HSPG2-210ENST00000481644 VPS33BQ9H267 617 aa23.81■■□□□ 1.4
HSPG2-210ENST00000481644 DUOX1Q9NRD9 1551 aa23.81■■□□□ 1.4
HSPG2-210ENST00000481644 POTECB2RU33 542 aa23.8■■□□□ 1.4
HSPG2-210ENST00000481644 NIM1KQ8IY84 436 aa23.8■■□□□ 1.4
HSPG2-210ENST00000481644 EIF6P56537 245 aaKnown RBP23.79■■□□□ 1.4
HSPG2-210ENST00000481644 SLC4A10Q6U841 1118 aa23.79■■□□□ 1.4
HSPG2-210ENST00000481644 TTLL11Q8NHH1 800 aa23.79■■□□□ 1.4
HSPG2-210ENST00000481644 SSH1Q8WYL5 1049 aa23.79■■□□□ 1.4
HSPG2-210ENST00000481644 NSFL1CQ9UNZ2 370 aaKnown RBP23.79■■□□□ 1.4
HSPG2-210ENST00000481644 SCN4AP35499 1836 aa23.78■■□□□ 1.4
HSPG2-210ENST00000481644 SPEF2Q9C093 1822 aa23.78■■□□□ 1.4
HSPG2-210ENST00000481644 CASP7P55210 303 aa23.78■■□□□ 1.4
HSPG2-210ENST00000481644 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
HSPG2-210ENST00000481644 LTBP1Q14766 1721 aa23.78■■□□□ 1.4
HSPG2-210ENST00000481644 GPSM2P81274 684 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 KIAA2012Q0VF49 1180 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 L3MBTL3Q96JM7 780 aaPredicted RBP23.77■■□□□ 1.4
HSPG2-210ENST00000481644 CDC5LQ99459 802 aaKnown RBP23.77■■□□□ 1.4
HSPG2-210ENST00000481644 PLA2G12BQ9BX93 195 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 BCL2L13Q9BXK5 485 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 GREM2Q9H772 168 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 RTL9Q8NET4 1388 aa23.77■■□□□ 1.4
HSPG2-210ENST00000481644 IQCA1LA6NCM1 817 aa23.76■■□□□ 1.39
HSPG2-210ENST00000481644 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
HSPG2-210ENST00000481644 GPC2Q8N158 579 aa23.76■■□□□ 1.39
HSPG2-210ENST00000481644 PTPRCP08575 1304 aa23.76■■□□□ 1.39
HSPG2-210ENST00000481644 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
HSPG2-210ENST00000481644 HSPA6P17066 643 aa23.75■■□□□ 1.39
HSPG2-210ENST00000481644 FSTL1Q12841 308 aa23.75■■□□□ 1.39
HSPG2-210ENST00000481644 SRCIN1Q9C0H9 1055 aa23.75■■□□□ 1.39
HSPG2-210ENST00000481644 C6orf229H3BNL8 230 aa23.74■■□□□ 1.39
HSPG2-210ENST00000481644 ALDH1L1O75891 902 aa23.74■■□□□ 1.39
HSPG2-210ENST00000481644 SMC1BQ8NDV3 1235 aa23.74■■□□□ 1.39
HSPG2-210ENST00000481644 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
HSPG2-210ENST00000481644 GJA3Q9Y6H8 435 aa23.74■■□□□ 1.39
HSPG2-210ENST00000481644 GRM8O00222 908 aa23.73■■□□□ 1.39
HSPG2-210ENST00000481644 HNRNPUQ00839 825 aaKnown RBP eCLIP23.73■■□□□ 1.39
HSPG2-210ENST00000481644 ANKIB1Q9P2G1 1089 aa23.73■■□□□ 1.39
HSPG2-210ENST00000481644 POLLQ9UGP5 575 aa23.73■■□□□ 1.39
HSPG2-210ENST00000481644 ZNRF3Q9ULT6 936 aa23.73■■□□□ 1.39
HSPG2-210ENST00000481644 WASHC4Q2M389 1173 aa23.72■■□□□ 1.39
HSPG2-210ENST00000481644 FAM161AQ3B820 660 aa23.72■■□□□ 1.39
HSPG2-210ENST00000481644 EYA3Q99504 573 aa23.72■■□□□ 1.39
HSPG2-210ENST00000481644 PODXL2Q9NZ53 605 aa23.72■■□□□ 1.39
HSPG2-210ENST00000481644 C9orf78Q9NZ63 289 aaPredicted RBP23.72■■□□□ 1.39
HSPG2-210ENST00000481644 CSF1RP07333 972 aa23.71■■□□□ 1.39
HSPG2-210ENST00000481644 TBC1D16Q8TBP0 767 aa23.71■■□□□ 1.39
HSPG2-210ENST00000481644 TAF1DQ9H5J8 278 aaPredicted RBP23.71■■□□□ 1.39
HSPG2-210ENST00000481644 HACL1Q9UJ83 578 aa23.71■■□□□ 1.39
HSPG2-210ENST00000481644 RIMBP2O15034 1052 aa23.7■■□□□ 1.38
HSPG2-210ENST00000481644 UFL1O94874 794 aa23.7■■□□□ 1.38
HSPG2-210ENST00000481644 ITGA6P23229 1130 aa23.7■■□□□ 1.38
HSPG2-210ENST00000481644 BSDC1Q9NW68 430 aaPredicted RBP23.7■■□□□ 1.38
HSPG2-210ENST00000481644 GGA1Q9UJY5 639 aa23.7■■□□□ 1.38
HSPG2-210ENST00000481644 XDHP47989 1333 aa23.69■■□□□ 1.38
HSPG2-210ENST00000481644 IGHMBP2P38935 993 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms