RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 HDAC5Q9UQL6 1122 aa15.57■□□□□ 0.08
SHROOM3-205ENST00000481002 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
SHROOM3-205ENST00000481002 TAF1P21675 1872 aa15.57■□□□□ 0.08
SHROOM3-205ENST00000481002 NPR1P16066 1061 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 TTLL11Q8NHH1 800 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 MASTLQ96GX5 879 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
SHROOM3-205ENST00000481002 CACNA1SQ13698 1873 aa15.55■□□□□ 0.08
SHROOM3-205ENST00000481002 CTSWP56202 376 aa15.55■□□□□ 0.08
SHROOM3-205ENST00000481002 CRAMP1Q96RY5 1269 aa15.55■□□□□ 0.08
SHROOM3-205ENST00000481002 RTL9Q8NET4 1388 aa15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 ALDH1B1P30837 517 aa15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 CCDC152Q4G0S7 254 aa15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 RBM17Q96I25 401 aaKnown RBP15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
SHROOM3-205ENST00000481002 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 GNAI2P04899 355 aa15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 LMBR1LQ6UX01 489 aa15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 ANKRD44Q8N8A2 993 aa15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 LRRFIP2Q9Y608 721 aaKnown RBP15.53■□□□□ 0.08
SHROOM3-205ENST00000481002 ARFGEF1Q9Y6D6 1849 aa15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 DDX46Q7L014 1031 aaKnown RBP15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 CNKSR1Q969H4 720 aa15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 GREM2Q9H772 168 aa15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 ZBTB40Q9NUA8 1239 aa15.52■□□□□ 0.08
SHROOM3-205ENST00000481002 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
SHROOM3-205ENST00000481002 BBOX1O75936 387 aa15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 MTX1Q13505 466 aa15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 GRAPQ13588 217 aa15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 CCDC85AQ96PX6 553 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
SHROOM3-205ENST00000481002 COL4A1P02462 1669 aa15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 ITGA6P23229 1130 aa15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 PRPF40BQ6NWY9 871 aaKnown RBP15.49■□□□□ 0.07
SHROOM3-205ENST00000481002 SPEF2Q9C093 1822 aa15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 CCDC57Q2TAC2 916 aa15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 C7orf43Q8WVR3 580 aa15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 CELF1Q92879 486 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 CHMP3Q9Y3E7 222 aa15.48■□□□□ 0.07
SHROOM3-205ENST00000481002 ATP8B2P98198 1209 aa15.47■□□□□ 0.07
SHROOM3-205ENST00000481002 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
SHROOM3-205ENST00000481002 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
SHROOM3-205ENST00000481002 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
SHROOM3-205ENST00000481002 BCS1LQ9Y276 419 aa15.47■□□□□ 0.07
SHROOM3-205ENST00000481002 RFX5P48382 616 aaPredicted RBP15.46■□□□□ 0.07
SHROOM3-205ENST00000481002 AAMPQ13685 434 aa15.46■□□□□ 0.07
SHROOM3-205ENST00000481002 SP8Q8IXZ3 490 aa15.46■□□□□ 0.07
SHROOM3-205ENST00000481002 GOLGB1Q14789 3259 aaKnown RBP15.46■□□□□ 0.06
SHROOM3-205ENST00000481002 LRRC37AA6NMS7 1700 aa15.46■□□□□ 0.06
SHROOM3-205ENST00000481002 PPEF1O14829 653 aaPredicted RBP15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 CEP85Q6P2H3 762 aa15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 RPAP2Q8IXW5 612 aaPredicted RBP15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 BSDC1Q9NW68 430 aaPredicted RBP15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 FER1L6Q2WGJ9 1857 aa15.45■□□□□ 0.06
SHROOM3-205ENST00000481002 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 SRGAP3O43295 1099 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 C21orf2O43822 256 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 POLA2Q14181 598 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 EXOC6Q8TAG9 804 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 SSH3Q8TE77 659 aa15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 ZNF594Q96JF6 807 aaPredicted RBP15.44■□□□□ 0.06
SHROOM3-205ENST00000481002 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
SHROOM3-205ENST00000481002 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
SHROOM3-205ENST00000481002 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 GPR162Q16538 588 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 GRIPAP1Q4V328 841 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 TAF7LQ5H9L4 462 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 LDHAL6AQ6ZMR3 332 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 MINPP1Q9UNW1 487 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 SNED1Q8TER0 1413 aa15.42■□□□□ 0.06
SHROOM3-205ENST00000481002 A0A1B0GUL6 1792 aa15.41■□□□□ 0.06
SHROOM3-205ENST00000481002 CCDC93Q567U6 631 aa15.41■□□□□ 0.06
SHROOM3-205ENST00000481002 OLFM4Q6UX06 510 aa15.41■□□□□ 0.06
SHROOM3-205ENST00000481002 SLC51AQ86UW1 340 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms