RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 NEXNQ0ZGT2 675 aa21.79■■□□□ 1.08
HSPG2-209ENST00000480900 FLIIQ13045 1269 aa21.79■■□□□ 1.08
HSPG2-209ENST00000480900 TMC4Q7Z404 712 aa21.79■■□□□ 1.08
HSPG2-209ENST00000480900 CEP350Q5VT06 3117 aa21.79■■□□□ 1.08
HSPG2-209ENST00000480900 HSPA6P17066 643 aa21.78■■□□□ 1.08
HSPG2-209ENST00000480900 SLC51AQ86UW1 340 aa21.78■■□□□ 1.08
HSPG2-209ENST00000480900 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
HSPG2-209ENST00000480900 COL4A5P29400 1685 aa21.77■■□□□ 1.08
HSPG2-209ENST00000480900 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
HSPG2-209ENST00000480900 JDP2Q8WYK2 163 aa21.77■■□□□ 1.08
HSPG2-209ENST00000480900 POTECB2RU33 542 aa21.76■■□□□ 1.07
HSPG2-209ENST00000480900 FZD9O00144 591 aa21.76■■□□□ 1.07
HSPG2-209ENST00000480900 DDNO94850 711 aaPredicted RBP21.76■■□□□ 1.07
HSPG2-209ENST00000480900 FSTL1Q12841 308 aa21.76■■□□□ 1.07
HSPG2-209ENST00000480900 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
HSPG2-209ENST00000480900 ZNF541Q9H0D2 1346 aa21.76■■□□□ 1.07
HSPG2-209ENST00000480900 FKBP5Q13451 457 aaPredicted RBP21.75■■□□□ 1.07
HSPG2-209ENST00000480900 SUPT20HQ8NEM7 779 aa21.75■■□□□ 1.07
HSPG2-209ENST00000480900 L3MBTL3Q96JM7 780 aaPredicted RBP21.75■■□□□ 1.07
HSPG2-209ENST00000480900 RTFDC1Q9BY42 306 aaPredicted RBP21.75■■□□□ 1.07
HSPG2-209ENST00000480900 VPS33BQ9H267 617 aa21.75■■□□□ 1.07
HSPG2-209ENST00000480900 COL4A1P02462 1669 aa21.75■■□□□ 1.07
HSPG2-209ENST00000480900 NEURL1BA8MQ27 555 aa21.74■■□□□ 1.07
HSPG2-209ENST00000480900 PDE8AO60658 829 aa21.74■■□□□ 1.07
HSPG2-209ENST00000480900 DPP8Q6V1X1 898 aaPredicted RBP21.74■■□□□ 1.07
HSPG2-209ENST00000480900 LARGE2Q8N3Y3 721 aa21.74■■□□□ 1.07
HSPG2-209ENST00000480900 LTBP1Q14766 1721 aa21.73■■□□□ 1.07
HSPG2-209ENST00000480900 MPNDQ8N594 471 aa21.73■■□□□ 1.07
HSPG2-209ENST00000480900 SMC1BQ8NDV3 1235 aa21.73■■□□□ 1.07
HSPG2-209ENST00000480900 DNAAF4Q8WXU2 420 aa21.73■■□□□ 1.07
HSPG2-209ENST00000480900 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
HSPG2-209ENST00000480900 DUOX1Q9NRD9 1551 aa21.73■■□□□ 1.07
HSPG2-209ENST00000480900 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
HSPG2-209ENST00000480900 PPIP5K2O43314 1243 aa21.72■■□□□ 1.07
HSPG2-209ENST00000480900 CWF19L2Q2TBE0 894 aaKnown RBP21.72■■□□□ 1.07
HSPG2-209ENST00000480900 CCDC152Q4G0S7 254 aa21.72■■□□□ 1.07
HSPG2-209ENST00000480900 E9PSI1 815 aa21.71■■□□□ 1.07
HSPG2-209ENST00000480900 RPS8P62241 208 aaKnown RBP21.71■■□□□ 1.07
HSPG2-209ENST00000480900 JARID2Q92833 1246 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-209ENST00000480900 EIF6P56537 245 aaKnown RBP21.7■■□□□ 1.06
HSPG2-209ENST00000480900 AOC3Q16853 763 aa21.7■■□□□ 1.06
HSPG2-209ENST00000480900 NIM1KQ8IY84 436 aa21.7■■□□□ 1.06
HSPG2-209ENST00000480900 GPC2Q8N158 579 aa21.7■■□□□ 1.06
HSPG2-209ENST00000480900 LINS1Q8NG48 757 aa21.7■■□□□ 1.06
HSPG2-209ENST00000480900 SPEF2Q9C093 1822 aa21.7■■□□□ 1.06
HSPG2-209ENST00000480900 APLP1P51693 650 aa21.69■■□□□ 1.06
HSPG2-209ENST00000480900 GCKRQ14397 625 aa21.69■■□□□ 1.06
HSPG2-209ENST00000480900 H7C1W4 665 aa21.68■■□□□ 1.06
HSPG2-209ENST00000480900 CTSWP56202 376 aa21.68■■□□□ 1.06
HSPG2-209ENST00000480900 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
HSPG2-209ENST00000480900 UBE3BQ7Z3V4 1068 aa21.68■■□□□ 1.06
HSPG2-209ENST00000480900 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
HSPG2-209ENST00000480900 SLFN5Q08AF3 891 aa21.67■■□□□ 1.06
HSPG2-209ENST00000480900 RTL9Q8NET4 1388 aa21.66■■□□□ 1.06
HSPG2-209ENST00000480900 TAF1DQ9H5J8 278 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-209ENST00000480900 HACL1Q9UJ83 578 aa21.66■■□□□ 1.06
HSPG2-209ENST00000480900 NSFL1CQ9UNZ2 370 aaKnown RBP21.66■■□□□ 1.06
HSPG2-209ENST00000480900 ADAMTSL1Q8N6G6 1762 aa21.66■■□□□ 1.06
HSPG2-209ENST00000480900 F6X3S4 739 aa21.65■■□□□ 1.06
HSPG2-209ENST00000480900 TTLL11Q8NHH1 800 aa21.65■■□□□ 1.06
HSPG2-209ENST00000480900 PLA2G12BQ9BX93 195 aa21.65■■□□□ 1.06
HSPG2-209ENST00000480900 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
HSPG2-209ENST00000480900 CASP7P55210 303 aa21.64■■□□□ 1.05
HSPG2-209ENST00000480900 GPSM2P81274 684 aa21.64■■□□□ 1.05
HSPG2-209ENST00000480900 BEND3Q5T5X7 828 aa21.64■■□□□ 1.05
HSPG2-209ENST00000480900 ANKRD18AQ8IVF6 992 aa21.64■■□□□ 1.05
HSPG2-209ENST00000480900 CCDC85AQ96PX6 553 aaPredicted RBP21.64■■□□□ 1.05
HSPG2-209ENST00000480900 CDC5LQ99459 802 aaKnown RBP21.64■■□□□ 1.05
HSPG2-209ENST00000480900 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
HSPG2-209ENST00000480900 DIEXFQ68CQ4 756 aaKnown RBP21.63■■□□□ 1.05
HSPG2-209ENST00000480900 CHADLQ6NUI6 762 aa21.63■■□□□ 1.05
HSPG2-209ENST00000480900 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
HSPG2-209ENST00000480900 EPHX2P34913 555 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 WASHC4Q2M389 1173 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 CDCA7LQ96GN5 454 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 GREM2Q9H772 168 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
HSPG2-209ENST00000480900 C6orf229H3BNL8 230 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 CXCL9Q07325 125 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-209ENST00000480900 TRMT2AQ8IZ69 625 aaKnown RBP21.61■■□□□ 1.05
HSPG2-209ENST00000480900 TBC1D16Q8TBP0 767 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 EYA3Q99504 573 aa21.61■■□□□ 1.05
HSPG2-209ENST00000480900 LMOD1P29536 600 aaPredicted RBP21.6■■□□□ 1.05
HSPG2-209ENST00000480900 SCNN1DP51172 638 aa21.6■■□□□ 1.05
HSPG2-209ENST00000480900 MRPL50Q8N5N7 158 aaKnown RBP21.6■■□□□ 1.05
HSPG2-209ENST00000480900 PSME4Q14997 1843 aa21.59■■□□□ 1.05
HSPG2-209ENST00000480900 SCN9AQ15858 1988 aa21.59■■□□□ 1.05
HSPG2-209ENST00000480900 ALDH1L1O75891 902 aa21.59■■□□□ 1.05
HSPG2-209ENST00000480900 CIAPIN1Q6FI81 312 aa21.59■■□□□ 1.05
HSPG2-209ENST00000480900 ANKIB1Q9P2G1 1089 aa21.59■■□□□ 1.05
HSPG2-209ENST00000480900 XDHP47989 1333 aa21.58■■□□□ 1.05
HSPG2-209ENST00000480900 UFL1O94874 794 aa21.58■■□□□ 1.05
HSPG2-209ENST00000480900 CSF1RP07333 972 aa21.58■■□□□ 1.05
HSPG2-209ENST00000480900 TNIP1Q15025 636 aa21.58■■□□□ 1.05
HSPG2-209ENST00000480900 EAPPQ56P03 285 aaPredicted RBP21.58■■□□□ 1.05
HSPG2-209ENST00000480900 MIER1Q8N108 512 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms