RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
PTPN7-212ENST00000480836 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
PTPN7-212ENST00000480836 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
PTPN7-212ENST00000480836 SH3TC1Q8TE82 1336 aa17.39■□□□□ 0.37
PTPN7-212ENST00000480836 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 MPNDQ8N594 471 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
PTPN7-212ENST00000480836 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-212ENST00000480836 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 ZNRF3Q9ULT6 936 aa17.38■□□□□ 0.37
PTPN7-212ENST00000480836 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
PTPN7-212ENST00000480836 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-212ENST00000480836 APAF1O14727 1248 aa17.37■□□□□ 0.37
PTPN7-212ENST00000480836 RAD17O75943 681 aa17.37■□□□□ 0.37
PTPN7-212ENST00000480836 GMPSP49915 693 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-212ENST00000480836 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
PTPN7-212ENST00000480836 GRAPQ13588 217 aa17.37■□□□□ 0.37
PTPN7-212ENST00000480836 DPP8Q6V1X1 898 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-212ENST00000480836 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-212ENST00000480836 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
PTPN7-212ENST00000480836 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-212ENST00000480836 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
PTPN7-212ENST00000480836 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-212ENST00000480836 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-212ENST00000480836 WDR33Q9C0J8 1336 aaKnown RBP17.36■□□□□ 0.37
PTPN7-212ENST00000480836 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-212ENST00000480836 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPN7-212ENST00000480836 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
PTPN7-212ENST00000480836 C8orf58Q8NAV2 365 aa17.35■□□□□ 0.37
PTPN7-212ENST00000480836 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-212ENST00000480836 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
PTPN7-212ENST00000480836 LBX1P52954 281 aa17.34■□□□□ 0.37
PTPN7-212ENST00000480836 GPSM2P81274 684 aa17.34■□□□□ 0.37
PTPN7-212ENST00000480836 TRPM4Q8TD43 1214 aa17.34■□□□□ 0.37
PTPN7-212ENST00000480836 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-212ENST00000480836 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
PTPN7-212ENST00000480836 PGAP2Q9UHJ9 254 aa17.34■□□□□ 0.37
PTPN7-212ENST00000480836 ABT1Q9ULW3 272 aaKnown RBP17.34■□□□□ 0.37
PTPN7-212ENST00000480836 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-212ENST00000480836 EGFRP00533 1210 aa17.33■□□□□ 0.36
PTPN7-212ENST00000480836 HOXB7P09629 217 aa17.33■□□□□ 0.36
PTPN7-212ENST00000480836 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
PTPN7-212ENST00000480836 CYP4F22Q6NT55 531 aa17.33■□□□□ 0.36
PTPN7-212ENST00000480836 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
PTPN7-212ENST00000480836 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.36
PTPN7-212ENST00000480836 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-212ENST00000480836 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
PTPN7-212ENST00000480836 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
PTPN7-212ENST00000480836 TSPYL6Q8N831 410 aa17.32■□□□□ 0.36
PTPN7-212ENST00000480836 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
PTPN7-212ENST00000480836 NSFL1CQ9UNZ2 370 aaKnown RBP17.32■□□□□ 0.36
PTPN7-212ENST00000480836 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
PTPN7-212ENST00000480836 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
PTPN7-212ENST00000480836 HSPA8P11142 646 aaKnown RBP17.31■□□□□ 0.36
PTPN7-212ENST00000480836 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
PTPN7-212ENST00000480836 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
PTPN7-212ENST00000480836 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
PTPN7-212ENST00000480836 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
PTPN7-212ENST00000480836 AOC2O75106 756 aa17.3■□□□□ 0.36
PTPN7-212ENST00000480836 CTCFP49711 727 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-212ENST00000480836 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
PTPN7-212ENST00000480836 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
PTPN7-212ENST00000480836 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
PTPN7-212ENST00000480836 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
PTPN7-212ENST00000480836 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
PTPN7-212ENST00000480836 PSMD14O00487 310 aa17.29■□□□□ 0.36
PTPN7-212ENST00000480836 GRM1Q13255 1194 aa17.29■□□□□ 0.36
PTPN7-212ENST00000480836 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
PTPN7-212ENST00000480836 MYD88Q99836 296 aa17.29■□□□□ 0.36
PTPN7-212ENST00000480836 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-212ENST00000480836 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
PTPN7-212ENST00000480836 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 SAPCD2Q86UD0 394 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-212ENST00000480836 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 TRPM7Q96QT4 1865 aa17.28■□□□□ 0.36
PTPN7-212ENST00000480836 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
PTPN7-212ENST00000480836 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
PTPN7-212ENST00000480836 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
PTPN7-212ENST00000480836 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
PTPN7-212ENST00000480836 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
PTPN7-212ENST00000480836 TSKSQ9UJT2 592 aa17.27■□□□□ 0.36
PTPN7-212ENST00000480836 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
PTPN7-212ENST00000480836 TNIP1Q15025 636 aa17.26■□□□□ 0.35
PTPN7-212ENST00000480836 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
PTPN7-212ENST00000480836 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-212ENST00000480836 GNAI1P63096 354 aa17.25■□□□□ 0.35
PTPN7-212ENST00000480836 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-212ENST00000480836 G2E3Q7L622 706 aa17.25■□□□□ 0.35
PTPN7-212ENST00000480836 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
PTPN7-212ENST00000480836 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
PTPN7-212ENST00000480836 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
PTPN7-212ENST00000480836 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
PTPN7-212ENST00000480836 ECE2O60344 883 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms