RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
COL4A2-206ENST00000480609 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
COL4A2-206ENST00000480609 LRP5O75197 1615 aa16.35■□□□□ 0.21
COL4A2-206ENST00000480609 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
COL4A2-206ENST00000480609 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
COL4A2-206ENST00000480609 ERC1Q8IUD2 1116 aa16.35■□□□□ 0.21
COL4A2-206ENST00000480609 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
COL4A2-206ENST00000480609 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
COL4A2-206ENST00000480609 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
COL4A2-206ENST00000480609 ST5P78524 1137 aa16.34■□□□□ 0.21
COL4A2-206ENST00000480609 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
COL4A2-206ENST00000480609 MMP10P09238 476 aa16.33■□□□□ 0.2
COL4A2-206ENST00000480609 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
COL4A2-206ENST00000480609 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
COL4A2-206ENST00000480609 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
COL4A2-206ENST00000480609 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
COL4A2-206ENST00000480609 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.2
COL4A2-206ENST00000480609 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
COL4A2-206ENST00000480609 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
COL4A2-206ENST00000480609 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
COL4A2-206ENST00000480609 SURF6O75683 361 aaKnown RBP16.32■□□□□ 0.2
COL4A2-206ENST00000480609 ITGA6P23229 1130 aa16.32■□□□□ 0.2
COL4A2-206ENST00000480609 HOXA10P31260 410 aaPredicted RBP16.32■□□□□ 0.2
COL4A2-206ENST00000480609 FAM161AQ3B820 660 aa16.32■□□□□ 0.2
COL4A2-206ENST00000480609 GREM2Q9H772 168 aa16.32■□□□□ 0.2
COL4A2-206ENST00000480609 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
COL4A2-206ENST00000480609 EYA2O00167 538 aa16.31■□□□□ 0.2
COL4A2-206ENST00000480609 MSH5O43196 834 aa16.31■□□□□ 0.2
COL4A2-206ENST00000480609 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
COL4A2-206ENST00000480609 CHD1LQ86WJ1 897 aa16.31■□□□□ 0.2
COL4A2-206ENST00000480609 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
COL4A2-206ENST00000480609 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
COL4A2-206ENST00000480609 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL4A2-206ENST00000480609 ATG9AQ7Z3C6 839 aa16.3■□□□□ 0.2
COL4A2-206ENST00000480609 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
COL4A2-206ENST00000480609 LRRCC1Q9C099 1032 aa16.3■□□□□ 0.2
COL4A2-206ENST00000480609 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 SGIP1Q9BQI5 828 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
COL4A2-206ENST00000480609 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
COL4A2-206ENST00000480609 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
COL4A2-206ENST00000480609 TNRC6CQ9HCJ0 1690 aaKnown RBP16.28■□□□□ 0.2
COL4A2-206ENST00000480609 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
COL4A2-206ENST00000480609 SASH1O94885 1247 aa16.28■□□□□ 0.2
COL4A2-206ENST00000480609 PDE6BP35913 854 aa16.28■□□□□ 0.2
COL4A2-206ENST00000480609 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
COL4A2-206ENST00000480609 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-206ENST00000480609 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
COL4A2-206ENST00000480609 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
COL4A2-206ENST00000480609 ZBTB22O15209 634 aa16.27■□□□□ 0.2
COL4A2-206ENST00000480609 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
COL4A2-206ENST00000480609 OSBPL3Q9H4L5 887 aa16.27■□□□□ 0.2
COL4A2-206ENST00000480609 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
COL4A2-206ENST00000480609 R3HDM1Q15032 1099 aaKnown RBP16.26■□□□□ 0.19
COL4A2-206ENST00000480609 VGLL2Q8N8G2 317 aa16.26■□□□□ 0.19
COL4A2-206ENST00000480609 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
COL4A2-206ENST00000480609 NPHP1O15259 732 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 BBOX1O75936 387 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 SRGNP10124 158 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 IGHMBP2P38935 993 aaKnown RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 GRAPQ13588 217 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 DDX46Q7L014 1031 aaKnown RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
COL4A2-206ENST00000480609 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 STAP2Q9UGK3 403 aa16.25■□□□□ 0.19
COL4A2-206ENST00000480609 AOX1Q06278 1338 aa16.24■□□□□ 0.19
COL4A2-206ENST00000480609 NPR1P16066 1061 aa16.24■□□□□ 0.19
COL4A2-206ENST00000480609 PDE4AP27815 886 aa16.24■□□□□ 0.19
COL4A2-206ENST00000480609 LRRC24Q50LG9 513 aa16.24■□□□□ 0.19
COL4A2-206ENST00000480609 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
COL4A2-206ENST00000480609 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
COL4A2-206ENST00000480609 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
COL4A2-206ENST00000480609 POLD1P28340 1107 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 PUS3Q9BZE2 481 aaKnown RBP16.23■□□□□ 0.19
COL4A2-206ENST00000480609 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
COL4A2-206ENST00000480609 PDE8BO95263 885 aa16.22■□□□□ 0.19
COL4A2-206ENST00000480609 FGFR2P21802 821 aa16.22■□□□□ 0.19
COL4A2-206ENST00000480609 ALDH1B1P30837 517 aa16.22■□□□□ 0.19
COL4A2-206ENST00000480609 PTGER2P43116 358 aa16.22■□□□□ 0.19
COL4A2-206ENST00000480609 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
COL4A2-206ENST00000480609 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
COL4A2-206ENST00000480609 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
COL4A2-206ENST00000480609 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
COL4A2-206ENST00000480609 TGFB2P61812 414 aa16.21■□□□□ 0.19
COL4A2-206ENST00000480609 TNNI3KQ59H18 835 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms