RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SCN4AP35499 1836 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 TAF1P21675 1872 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 KSR2Q6VAB6 950 aa19.65■□□□□ 0.74
CDK9-203ENST00000480353 MPNDQ8N594 471 aa19.65■□□□□ 0.74
CDK9-203ENST00000480353 GJA3Q9Y6H8 435 aa19.65■□□□□ 0.74
CDK9-203ENST00000480353 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
CDK9-203ENST00000480353 FZD9O00144 591 aa19.64■□□□□ 0.73
CDK9-203ENST00000480353 PI4KAP2A4QPH2 592 aa19.63■□□□□ 0.73
CDK9-203ENST00000480353 POTECB2RU33 542 aa19.63■□□□□ 0.73
CDK9-203ENST00000480353 LMOD1P29536 600 aaPredicted RBP19.63■□□□□ 0.73
CDK9-203ENST00000480353 SF3B3Q15393 1217 aaKnown RBP19.63■□□□□ 0.73
CDK9-203ENST00000480353 EAPPQ56P03 285 aaPredicted RBP19.63■□□□□ 0.73
CDK9-203ENST00000480353 PI4KAP1Q8N8J0 262 aa19.63■□□□□ 0.73
CDK9-203ENST00000480353 VPS33BQ9H267 617 aa19.63■□□□□ 0.73
CDK9-203ENST00000480353 HACL1Q9UJ83 578 aa19.63■□□□□ 0.73
CDK9-203ENST00000480353 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
CDK9-203ENST00000480353 AOC3Q16853 763 aa19.62■□□□□ 0.73
CDK9-203ENST00000480353 CCDC152Q4G0S7 254 aa19.62■□□□□ 0.73
CDK9-203ENST00000480353 GPC2Q8N158 579 aa19.62■□□□□ 0.73
CDK9-203ENST00000480353 L3MBTL3Q96JM7 780 aaPredicted RBP19.62■□□□□ 0.73
CDK9-203ENST00000480353 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
CDK9-203ENST00000480353 SNED1Q8TER0 1413 aa19.61■□□□□ 0.73
CDK9-203ENST00000480353 PDE8AO60658 829 aa19.61■□□□□ 0.73
CDK9-203ENST00000480353 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
CDK9-203ENST00000480353 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
CDK9-203ENST00000480353 CHADLQ6NUI6 762 aa19.61■□□□□ 0.73
CDK9-203ENST00000480353 EPHX2P34913 555 aa19.59■□□□□ 0.73
CDK9-203ENST00000480353 FLIIQ13045 1269 aa19.59■□□□□ 0.73
CDK9-203ENST00000480353 SLC51AQ86UW1 340 aa19.59■□□□□ 0.73
CDK9-203ENST00000480353 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
CDK9-203ENST00000480353 JARID2Q92833 1246 aaPredicted RBP19.59■□□□□ 0.73
CDK9-203ENST00000480353 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
CDK9-203ENST00000480353 TAF1DQ9H5J8 278 aaPredicted RBP19.59■□□□□ 0.73
CDK9-203ENST00000480353 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
CDK9-203ENST00000480353 MYH3P11055 1940 aa19.59■□□□□ 0.73
CDK9-203ENST00000480353 C6orf229H3BNL8 230 aa19.58■□□□□ 0.72
CDK9-203ENST00000480353 RPS8P62241 208 aaKnown RBP19.58■□□□□ 0.72
CDK9-203ENST00000480353 G2E3Q7L622 706 aa19.58■□□□□ 0.72
CDK9-203ENST00000480353 LDHDQ86WU2 507 aa19.58■□□□□ 0.72
CDK9-203ENST00000480353 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.72
CDK9-203ENST00000480353 VAMP4O75379 141 aa19.57■□□□□ 0.72
CDK9-203ENST00000480353 EYA3Q99504 573 aa19.57■□□□□ 0.72
CDK9-203ENST00000480353 RTFDC1Q9BY42 306 aaPredicted RBP19.57■□□□□ 0.72
CDK9-203ENST00000480353 ZNRF3Q9ULT6 936 aa19.57■□□□□ 0.72
CDK9-203ENST00000480353 G3V3G9 751 aa19.56■□□□□ 0.72
CDK9-203ENST00000480353 HTRA3P83110 453 aa19.56■□□□□ 0.72
CDK9-203ENST00000480353 CWF19L2Q2TBE0 894 aaKnown RBP19.56■□□□□ 0.72
CDK9-203ENST00000480353 DCAF8Q5TAQ9 597 aa19.56■□□□□ 0.72
CDK9-203ENST00000480353 DNAAF4Q8WXU2 420 aa19.56■□□□□ 0.72
CDK9-203ENST00000480353 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
CDK9-203ENST00000480353 CDHR2Q9BYE9 1310 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 NEURL1BA8MQ27 555 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 IGKV5-2P06315 115 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 POTEIP0CG38 1075 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 POTEJP0CG39 1038 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 KIAA2012Q0VF49 1180 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 ANKRD18AQ8IVF6 992 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 BCL2L13Q9BXK5 485 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 ANKIB1Q9P2G1 1089 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 COL4A5P29400 1685 aa19.55■□□□□ 0.72
CDK9-203ENST00000480353 TNIP1Q15025 636 aa19.54■□□□□ 0.72
CDK9-203ENST00000480353 CDC5LQ99459 802 aaKnown RBP19.54■□□□□ 0.72
CDK9-203ENST00000480353 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
CDK9-203ENST00000480353 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
CDK9-203ENST00000480353 CTSWP56202 376 aa19.53■□□□□ 0.72
CDK9-203ENST00000480353 CIAPIN1Q6FI81 312 aa19.53■□□□□ 0.72
CDK9-203ENST00000480353 UBE3BQ7Z3V4 1068 aa19.53■□□□□ 0.72
CDK9-203ENST00000480353 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
CDK9-203ENST00000480353 GPSM2P81274 684 aa19.52■□□□□ 0.72
CDK9-203ENST00000480353 SPEF2Q9C093 1822 aa19.52■□□□□ 0.72
CDK9-203ENST00000480353 CEP350Q5VT06 3117 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 RAD17O75943 681 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 CXCL9Q07325 125 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 GCKRQ14397 625 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 LINS1Q8NG48 757 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
CDK9-203ENST00000480353 GGA1Q9UJY5 639 aa19.51■□□□□ 0.71
CDK9-203ENST00000480353 UFL1O94874 794 aa19.5■□□□□ 0.71
CDK9-203ENST00000480353 E9PSI1 815 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 IGHMBP2P38935 993 aaKnown RBP19.49■□□□□ 0.71
CDK9-203ENST00000480353 EPS15P42566 896 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 SCNN1DP51172 638 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 DNAJC5GQ8N7S2 189 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 POLLQ9UGP5 575 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 DUOX1Q9NRD9 1551 aa19.49■□□□□ 0.71
CDK9-203ENST00000480353 H7C1W4 665 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 CCER2I3L3R5 266 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 GMPSP49915 693 aaPredicted RBP19.48■□□□□ 0.71
CDK9-203ENST00000480353 MAP1SQ66K74 1059 aaPredicted RBP19.48■□□□□ 0.71
CDK9-203ENST00000480353 SLC4A10Q6U841 1118 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 USP50Q70EL3 339 aaPredicted RBP19.48■□□□□ 0.71
CDK9-203ENST00000480353 TTLL11Q8NHH1 800 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 ADARB2Q9NS39 739 aaKnown RBP19.48■□□□□ 0.71
CDK9-203ENST00000480353 GPRC5DQ9NZD1 345 aa19.48■□□□□ 0.71
CDK9-203ENST00000480353 F6X3S4 739 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms