RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 FOXO4P98177 505 aa17.22■□□□□ 0.35
DENND4B-208ENST00000480340 LMBR1LQ6UX01 489 aa17.22■□□□□ 0.35
DENND4B-208ENST00000480340 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
DENND4B-208ENST00000480340 ZPR1O75312 459 aa17.22■□□□□ 0.35
DENND4B-208ENST00000480340 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
DENND4B-208ENST00000480340 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
DENND4B-208ENST00000480340 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
DENND4B-208ENST00000480340 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
DENND4B-208ENST00000480340 RFC4P35249 363 aa17.21■□□□□ 0.35
DENND4B-208ENST00000480340 RABL6Q3YEC7 729 aaPredicted RBP17.21■□□□□ 0.35
DENND4B-208ENST00000480340 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
DENND4B-208ENST00000480340 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
DENND4B-208ENST00000480340 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
DENND4B-208ENST00000480340 C16orf71Q8IYS4 520 aaPredicted RBP17.2■□□□□ 0.34
DENND4B-208ENST00000480340 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
DENND4B-208ENST00000480340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
DENND4B-208ENST00000480340 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
DENND4B-208ENST00000480340 OS9Q13438 667 aaPredicted RBP17.2■□□□□ 0.34
DENND4B-208ENST00000480340 CCDC85AQ96PX6 553 aaPredicted RBP17.19■□□□□ 0.34
DENND4B-208ENST00000480340 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
DENND4B-208ENST00000480340 SIL1Q9H173 461 aa17.19■□□□□ 0.34
DENND4B-208ENST00000480340 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
DENND4B-208ENST00000480340 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
DENND4B-208ENST00000480340 KIF2CQ99661 725 aa17.19■□□□□ 0.34
DENND4B-208ENST00000480340 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
DENND4B-208ENST00000480340 IRS4O14654 1257 aaPredicted RBP17.18■□□□□ 0.34
DENND4B-208ENST00000480340 UTP14AQ9BVJ6 771 aaKnown RBP17.18■□□□□ 0.34
DENND4B-208ENST00000480340 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
DENND4B-208ENST00000480340 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
DENND4B-208ENST00000480340 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
DENND4B-208ENST00000480340 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
DENND4B-208ENST00000480340 SNX21Q969T3 373 aa17.18■□□□□ 0.34
DENND4B-208ENST00000480340 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
DENND4B-208ENST00000480340 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
DENND4B-208ENST00000480340 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 TPM2P07951 284 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
DENND4B-208ENST00000480340 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
DENND4B-208ENST00000480340 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 NUTM1Q86Y26 1132 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
DENND4B-208ENST00000480340 UPF1Q92900 1129 aaKnown RBP eCLIP17.17■□□□□ 0.342e-7■■■□□ 16.4
DENND4B-208ENST00000480340 SH3TC1Q8TE82 1336 aa17.17■□□□□ 0.34
DENND4B-208ENST00000480340 NTSR2O95665 410 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 ADRA2BP18089 450 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 HCLS1P14317 486 aaPredicted RBP17.16■□□□□ 0.34
DENND4B-208ENST00000480340 SSFA2P28290 1259 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
DENND4B-208ENST00000480340 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.34
DENND4B-208ENST00000480340 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
DENND4B-208ENST00000480340 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
DENND4B-208ENST00000480340 ISY1Q9ULR0 285 aaKnown RBP17.16■□□□□ 0.34
DENND4B-208ENST00000480340 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
DENND4B-208ENST00000480340 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
DENND4B-208ENST00000480340 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
DENND4B-208ENST00000480340 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
DENND4B-208ENST00000480340 PDE8AO60658 829 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 PLEKHM2Q8IWE5 1019 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 ZNF594Q96JF6 807 aaPredicted RBP17.14■□□□□ 0.33
DENND4B-208ENST00000480340 LAMB2P55268 1798 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 RGL2O15211 777 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
DENND4B-208ENST00000480340 CTSWP56202 376 aa17.14■□□□□ 0.33
DENND4B-208ENST00000480340 TRIM44Q96DX7 344 aaPredicted RBP17.14■□□□□ 0.33
DENND4B-208ENST00000480340 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
DENND4B-208ENST00000480340 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 SASH1O94885 1247 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 CSF1RP07333 972 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
DENND4B-208ENST00000480340 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
DENND4B-208ENST00000480340 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
DENND4B-208ENST00000480340 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
DENND4B-208ENST00000480340 GREM2Q9H772 168 aa17.12■□□□□ 0.33
DENND4B-208ENST00000480340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
DENND4B-208ENST00000480340 DEFB132Q7Z7B7 95 aa17.12■□□□□ 0.33
DENND4B-208ENST00000480340 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
DENND4B-208ENST00000480340 GYS1P13807 737 aa17.11■□□□□ 0.33
DENND4B-208ENST00000480340 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
DENND4B-208ENST00000480340 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
DENND4B-208ENST00000480340 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
DENND4B-208ENST00000480340 NFIXQ14938 502 aa17.11■□□□□ 0.33
DENND4B-208ENST00000480340 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
DENND4B-208ENST00000480340 ITGA6P23229 1130 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 TAF1P21675 1872 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 BAG6P46379 1132 aa17.1■□□□□ 0.33
DENND4B-208ENST00000480340 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
DENND4B-208ENST00000480340 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
DENND4B-208ENST00000480340 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
DENND4B-208ENST00000480340 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms