RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 NFIXQ14938 502 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 RNF181Q9P0P0 153 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
CCHCR1-213ENST00000480060 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 NTSR2O95665 410 aa13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 HSP90B1P14625 803 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 VEGFAP15692 232 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 TM4SF1P30408 202 aa13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-213ENST00000480060 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 IRS4O14654 1257 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 NPHP1O15259 732 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 HMMRO75330 724 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 SYNE4Q8N205 404 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
CCHCR1-213ENST00000480060 CARMIL3Q8ND23 1372 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 PDE8AO60658 829 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 IGHDP01880 384 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 FOXO4P98177 505 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 NUTM1Q86Y26 1132 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 SIRT2Q8IXJ6 389 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 KIF13BQ9NQT8 1826 aa13.22□□□□□ -0.29
CCHCR1-213ENST00000480060 GLTPD2A6NH11 291 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 SERPINB2P05120 415 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 MTX1Q13505 466 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
CCHCR1-213ENST00000480060 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.3
CCHCR1-213ENST00000480060 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 POLRMTO00411 1230 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 RABL6Q3YEC7 729 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
CCHCR1-213ENST00000480060 CSF1RP07333 972 aa13.19□□□□□ -0.3
CCHCR1-213ENST00000480060 CTSWP56202 376 aa13.19□□□□□ -0.3
CCHCR1-213ENST00000480060 ST5P78524 1137 aa13.19□□□□□ -0.3
CCHCR1-213ENST00000480060 DDR1Q08345 913 aa13.19□□□□□ -0.3
CCHCR1-213ENST00000480060 POLA2Q14181 598 aa13.19□□□□□ -0.3
CCHCR1-213ENST00000480060 POTECB2RU33 542 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 FOXN1O15353 648 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 NLRP3Q96P20 1036 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
CCHCR1-213ENST00000480060 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-213ENST00000480060 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
CCHCR1-213ENST00000480060 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
CCHCR1-213ENST00000480060 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
CCHCR1-213ENST00000480060 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
CCHCR1-213ENST00000480060 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 LMNB1P20700 586 aa13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 IFIT5Q13325 482 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-213ENST00000480060 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 ITGA6P23229 1130 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 RFX5P48382 616 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 G3BP1Q13283 466 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 GREM2Q9H772 168 aa13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-213ENST00000480060 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 CHRNA5P30532 468 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
CCHCR1-213ENST00000480060 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 375 ms