RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, human

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2-208	ENST00000479815	RTCB	Q9Y3I0	505 aa	Known RBP	10.88	□□□□□ -0.67
HMGN2-208	ENST00000479815	COL24A1	Q17RW2	1714 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	QSER1	Q2KHR3	1735 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815		H7C1W4	665 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	HLF	Q16534	295 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	SIRT2	Q8IXJ6	389 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	AK7	Q96M32	723 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	RWDD1	Q9H446	243 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	ZNF652	Q9Y2D9	606 aa		10.87	□□□□□ -0.67
HMGN2-208	ENST00000479815	USP42	Q9H9J4	1324 aa	Known RBP	10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	PARP10	Q53GL7	1025 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	NLRP10	Q86W26	655 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	AMIGO3	Q86WK7	504 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	SMC5	Q8IY18	1101 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	KAZALD1	Q96I82	304 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	PLA2G12B	Q9BX93	195 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	TBC1D2B	Q9UPU7	963 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	TUBGCP6	Q96RT7	1819 aa		10.86	□□□□□ -0.67
HMGN2-208	ENST00000479815	UBN2	Q6ZU65	1347 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	CDHR2	Q9BYE9	1310 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	ATP5J2-PTCD1	G3V325	749 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	IGHD	P01880	384 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	PCCA	P05165	728 aa	Predicted RBP	10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	RABL6	Q3YEC7	729 aa	Predicted RBP	10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	ARHGEF1	Q92888	912 aa	Known RBP	10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	C1orf115	Q9H7X2	142 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	BCL2L12	Q9HB09	334 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	LRRFIP2	Q9Y608	721 aa	Known RBP	10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	LAMB2	P55268	1798 aa		10.85	□□□□□ -0.67
HMGN2-208	ENST00000479815	HMMR	O75330	724 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	BAG6	P46379	1132 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	ATP8B2	P98198	1209 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	ZNF827	Q17R98	1081 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	TRAPPC3L	Q5T215	181 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	FLAD1	Q8NFF5	587 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	SSH3	Q8TE77	659 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	SUCLG2	Q96I99	432 aa		10.84	□□□□□ -0.67
HMGN2-208	ENST00000479815	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	PDAP1	Q13442	181 aa	Known RBP	10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	UBE3B	Q7Z3V4	1068 aa		10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	GCC1	Q96CN9	775 aa		10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	DCTPP1	Q9H773	170 aa		10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	RIC1	Q4ADV7	1423 aa		10.83	□□□□□ -0.68
HMGN2-208	ENST00000479815	ZPR1	O75312	459 aa		10.82	□□□□□ -0.68
HMGN2-208	ENST00000479815	NTSR2	O95665	410 aa		10.82	□□□□□ -0.68
HMGN2-208	ENST00000479815	SF3B2	Q13435	895 aa	Known RBP	10.82	□□□□□ -0.68
HMGN2-208	ENST00000479815	MYH3	P11055	1940 aa		10.82	□□□□□ -0.68
HMGN2-208	ENST00000479815	PNMA6E	A0A0J9YXQ4	647 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	GPT	P24298	496 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	RFC4	P35249	363 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	EN1	Q05925	392 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	EZH2	Q15910	746 aa	Known RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	EPHA10	Q5JZY3	1008 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	USPL1	Q5W0Q7	1092 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	DPY19L2	Q6NUT2	758 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	PPP1R42	Q7Z4L9	355 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	SPOCK2	Q92563	424 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	BICC1	Q9H694	974 aa	Known RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	SRP68	Q9UHB9	627 aa	Known RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	NOP58	Q9Y2X3	529 aa	Known RBP	10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	SH3TC1	Q8TE82	1336 aa		10.81	□□□□□ -0.68
HMGN2-208	ENST00000479815	CARMIL3	Q8ND23	1372 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	RTL9	Q8NET4	1388 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	GYS1	P13807	737 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	HSP90B1	P14625	803 aa	Known RBP	10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	FOXO4	P98177	505 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	SUSD4	Q5VX71	490 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	SPNS2	Q8IVW8	549 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	ARX	Q96QS3	562 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	UTP14A	Q9BVJ6	771 aa	Known RBP	10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	PNPLA7	Q6ZV29	1317 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	LRP5	O75197	1615 aa		10.8	□□□□□ -0.68
HMGN2-208	ENST00000479815	DDX60	Q8IY21	1712 aa	Known RBP	10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	SRGAP3	O43295	1099 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	CSF1R	P07333	972 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	RFX5	P48382	616 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	NUCB1	Q02818	461 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	MMRN1	Q13201	1228 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	SLC15A2	Q16348	729 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	TBC1D9B	Q66K14	1250 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	SMIM5	Q71RC9	77 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	NYX	Q9GZU5	481 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	COPRS	Q9NQ92	184 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	TFCP2L1	Q9NZI6	479 aa		10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	TRMT112	Q9UI30	125 aa	Known RBP	10.79	□□□□□ -0.68
HMGN2-208	ENST00000479815	NRXN2	Q9P2S2	1712 aa		10.78	□□□□□ -0.68
HMGN2-208	ENST00000479815	IRS4	O14654	1257 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGN2-208	ENST00000479815	PHF14	O94880	888 aa		10.78	□□□□□ -0.68
HMGN2-208	ENST00000479815	EMP3	P54852	163 aa		10.78	□□□□□ -0.68
HMGN2-208	ENST00000479815	NFIX	Q14938	502 aa		10.78	□□□□□ -0.68
HMGN2-208	ENST00000479815	SLC10A5	Q5PT55	438 aa		10.78	□□□□□ -0.68

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