RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 CALD1Q05682 793 aaKnown RBP22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 GOLGA2Q08379 1002 aa22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 DPP8Q6V1X1 898 aaPredicted RBP22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 GPC2Q8N158 579 aa22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
ECHDC1-216ENST00000479525 IRS4O14654 1257 aaPredicted RBP22.48■■□□□ 1.19
ECHDC1-216ENST00000479525 EPS15P42566 896 aa22.48■■□□□ 1.19
ECHDC1-216ENST00000479525 FMR1Q06787 632 aaKnown RBP eCLIP22.48■■□□□ 1.19
ECHDC1-216ENST00000479525 MPNDQ8N594 471 aa22.48■■□□□ 1.19
ECHDC1-216ENST00000479525 TMX4Q9H1E5 349 aaPredicted RBP22.48■■□□□ 1.19
ECHDC1-216ENST00000479525 SCNN1DP51172 638 aa22.47■■□□□ 1.19
ECHDC1-216ENST00000479525 SP8Q8IXZ3 490 aa22.47■■□□□ 1.19
ECHDC1-216ENST00000479525 GPR101Q96P66 508 aaPredicted RBP22.47■■□□□ 1.19
ECHDC1-216ENST00000479525 ANP32CO43423 234 aa22.46■■□□□ 1.19
ECHDC1-216ENST00000479525 BBOX1O75936 387 aa22.46■■□□□ 1.19
ECHDC1-216ENST00000479525 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
ECHDC1-216ENST00000479525 JMYQ8N9B5 988 aa22.46■■□□□ 1.19
ECHDC1-216ENST00000479525 SEC31BQ9NQW1 1179 aa22.45■■□□□ 1.18
ECHDC1-216ENST00000479525 MYH3P11055 1940 aa22.44■■□□□ 1.18
ECHDC1-216ENST00000479525 PASKQ96RG2 1323 aa22.44■■□□□ 1.18
ECHDC1-216ENST00000479525 RAD17O75943 681 aa22.44■■□□□ 1.18
ECHDC1-216ENST00000479525 G2E3Q7L622 706 aa22.44■■□□□ 1.18
ECHDC1-216ENST00000479525 RIMBP2O15034 1052 aa22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 ITGBL1O95965 494 aaPredicted RBP22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 LMOD1P29536 600 aaPredicted RBP22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 CXCL9Q07325 125 aa22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 CCDC30Q5VVM6 783 aa22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 MAP3K2Q9Y2U5 619 aa22.43■■□□□ 1.18
ECHDC1-216ENST00000479525 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
ECHDC1-216ENST00000479525 RTFDC1Q9BY42 306 aaPredicted RBP22.42■■□□□ 1.18
ECHDC1-216ENST00000479525 YDJCA8MPS7 323 aa22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 GPSM2P81274 684 aa22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 SF3B3Q15393 1217 aaKnown RBP22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 GRIPAP1Q4V328 841 aa22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 CNTROBQ8N137 903 aa22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 CREBZFQ9NS37 354 aa22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 NSFL1CQ9UNZ2 370 aaKnown RBP22.41■■□□□ 1.18
ECHDC1-216ENST00000479525 TRPM7Q96QT4 1865 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 HSPA1AP0DMV8 641 aaKnown RBP22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 HSPA1BP0DMV9 641 aaKnown RBP22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 KIAA2012Q0VF49 1180 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 TWISTNBQ3B726 338 aaPredicted RBP22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 IFFO2Q5TF58 517 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 ZBTB38Q8NAP3 1195 aaPredicted RBP22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 METTL22Q9BUU2 404 aaPredicted RBP22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 DBNDD1Q9H9R9 158 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 ZNRF3Q9ULT6 936 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 SCN9AQ15858 1988 aa22.4■■□□□ 1.18
ECHDC1-216ENST00000479525 C6orf229H3BNL8 230 aa22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 GMPSP49915 693 aaPredicted RBP22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 TRIM28Q13263 835 aaKnown RBP22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 PNMA8AQ86V59 439 aaPredicted RBP22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.18
ECHDC1-216ENST00000479525 PI4KAP2A4QPH2 592 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 IGKV5-2P06315 115 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 DOK7Q18PE1 504 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 CWF19L2Q2TBE0 894 aaKnown RBP22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 COL13A1Q5TAT6 717 aaPredicted RBP22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 PI4KAP1Q8N8J0 262 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 POLLQ9UGP5 575 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 TRAF5O00463 557 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 CCDC27Q2M243 656 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 KCNQ5Q9NR82 932 aa22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 ZBTB12Q9Y330 459 aaPredicted RBP22.38■■□□□ 1.17
ECHDC1-216ENST00000479525 DDX58O95786 925 aaKnown RBP22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 PCCAP05165 728 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 CCDC191Q8NCU4 936 aa22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 GPRC5DQ9NZD1 345 aa22.37■■□□□ 1.17
ECHDC1-216ENST00000479525 POLR2AP24928 1970 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 TMEM88BA6NKF7 163 aa22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 SLC4A2P04920 1241 aa22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 RPS8P62241 208 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 CNTNAP1P78357 1384 aa22.36■■□□□ 1.17
ECHDC1-216ENST00000479525 WASHC4Q2M389 1173 aa22.35■■□□□ 1.17
ECHDC1-216ENST00000479525 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
ECHDC1-216ENST00000479525 CACNA1FO60840 1977 aa22.34■■□□□ 1.17
ECHDC1-216ENST00000479525 PDE8AO60658 829 aa22.34■■□□□ 1.17
ECHDC1-216ENST00000479525 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
ECHDC1-216ENST00000479525 TRPM4Q8TD43 1214 aa22.34■■□□□ 1.17
ECHDC1-216ENST00000479525 WTIPA6NIX2 430 aaPredicted RBP22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 PSMD14O00487 310 aa22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 VEGFBP49765 207 aa22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 TMC4Q7Z404 712 aa22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 TBC1D16Q8TBP0 767 aa22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 VPS33BQ9H267 617 aa22.33■■□□□ 1.17
ECHDC1-216ENST00000479525 ECE2O60344 883 aa22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 UFL1O94874 794 aa22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 CCDC152Q4G0S7 254 aa22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 DLK2Q6UY11 383 aa22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 ADARB2Q9NS39 739 aaKnown RBP22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 ABT1Q9ULW3 272 aaKnown RBP22.32■■□□□ 1.16
ECHDC1-216ENST00000479525 HIRAP54198 1017 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms