RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ZFATQ9P243 1243 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 DCTN4Q9UJW0 460 aa9.79□□□□□ -0.84
CCDC58-204ENST00000479414 TARSP26639 723 aaKnown RBP9.78□□□□□ -0.84
CCDC58-204ENST00000479414 PCBP4P57723 403 aaKnown RBP9.78□□□□□ -0.84
CCDC58-204ENST00000479414 EHHADHQ08426 723 aa9.78□□□□□ -0.84
CCDC58-204ENST00000479414 MDFIQ99750 246 aa9.78□□□□□ -0.84
CCDC58-204ENST00000479414 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
CCDC58-204ENST00000479414 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
CCDC58-204ENST00000479414 NEURL1BA8MQ27 555 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 RARAP10276 462 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 FCHSD1Q86WN1 690 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 TTC16Q8NEE8 873 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
CCDC58-204ENST00000479414 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
CCDC58-204ENST00000479414 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
CCDC58-204ENST00000479414 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
CCDC58-204ENST00000479414 A6NHS1 94 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 IGHA2P01877 340 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 CELA2BP08218 269 aaPredicted RBP9.75□□□□□ -0.85
CCDC58-204ENST00000479414 BCRP11274 1271 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 LORP23490 312 aaPredicted RBP9.75□□□□□ -0.85
CCDC58-204ENST00000479414 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 ZNF438Q7Z4V0 828 aa9.75□□□□□ -0.85
CCDC58-204ENST00000479414 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
CCDC58-204ENST00000479414 OIP5O43482 229 aa9.74□□□□□ -0.85
CCDC58-204ENST00000479414 MMP20O60882 483 aa9.74□□□□□ -0.85
CCDC58-204ENST00000479414 EPXP11678 715 aa9.74□□□□□ -0.85
CCDC58-204ENST00000479414 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
CCDC58-204ENST00000479414 MAPK1P28482 360 aa9.74□□□□□ -0.85
CCDC58-204ENST00000479414 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
CCDC58-204ENST00000479414 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
CCDC58-204ENST00000479414 ABI2Q9NYB9 513 aaPredicted RBP9.74□□□□□ -0.85
CCDC58-204ENST00000479414 SOX18P35713 384 aa9.73□□□□□ -0.85
CCDC58-204ENST00000479414 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-204ENST00000479414 C1orf229Q6ZS94 237 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-204ENST00000479414 OR13H1Q8NG92 308 aa9.73□□□□□ -0.85
CCDC58-204ENST00000479414 DMRTB1Q96MA1 342 aa9.73□□□□□ -0.85
CCDC58-204ENST00000479414 TMEM63CQ9P1W3 806 aa9.73□□□□□ -0.85
CCDC58-204ENST00000479414 ELOA3CA0A087WX78 387 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-204ENST00000479414 ELOA3DA6NLF2 546 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-204ENST00000479414 NRLP54845 237 aa9.72□□□□□ -0.85
CCDC58-204ENST00000479414 ELOA3BQ3SY89 546 aa9.72□□□□□ -0.85
CCDC58-204ENST00000479414 TTC39BQ5VTQ0 682 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-204ENST00000479414 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
CCDC58-204ENST00000479414 TMC7Q7Z402 723 aa9.72□□□□□ -0.85
CCDC58-204ENST00000479414 ELOA3Q8NG57 546 aa9.72□□□□□ -0.85
CCDC58-204ENST00000479414 TRPM4Q8TD43 1214 aa9.72□□□□□ -0.85
CCDC58-204ENST00000479414 TNFRSF21O75509 655 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 PSAPP07602 524 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 ADH7P40394 386 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 GPLD1P80108 840 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
CCDC58-204ENST00000479414 PLAURQ03405 335 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 PCSK7Q16549 785 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 EDARADDQ8WWZ3 215 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 ALKBH8Q96BT7 664 aaKnown RBP9.71□□□□□ -0.86
CCDC58-204ENST00000479414 ASB16Q96NS5 453 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 DNAJB12Q9NXW2 375 aaKnown RBP9.71□□□□□ -0.86
CCDC58-204ENST00000479414 PODXL2Q9NZ53 605 aa9.71□□□□□ -0.86
CCDC58-204ENST00000479414 GPR182O15218 404 aa9.7□□□□□ -0.86
CCDC58-204ENST00000479414 ZSCAN29Q8IWY8 852 aaPredicted RBP9.7□□□□□ -0.86
CCDC58-204ENST00000479414 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
CCDC58-204ENST00000479414 GALNT6Q8NCL4 622 aa9.7□□□□□ -0.86
CCDC58-204ENST00000479414 UBE2OQ9C0C9 1292 aaKnown RBP9.7□□□□□ -0.86
CCDC58-204ENST00000479414 SHISA8B8ZZ34 492 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 CCDC27Q2M243 656 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 TMC1Q8TDI8 760 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 CHRDQ9H2X0 955 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 CNTN3Q9P232 1028 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 SLC6A14Q9UN76 642 aa9.69□□□□□ -0.86
CCDC58-204ENST00000479414 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 TREHO43280 583 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 NEFLP07196 543 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 SVOPQ8N4V2 548 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 C1orf127Q8N9H9 656 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 IGFLR1Q9H665 355 aa9.68□□□□□ -0.86
CCDC58-204ENST00000479414 FOXD3Q9UJU5 478 aaPredicted RBP9.68□□□□□ -0.86
CCDC58-204ENST00000479414 PHACTR2O75167 634 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 ALAS2P22557 587 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 DSC3Q14574 896 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 TMCO4Q5TGY1 634 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
CCDC58-204ENST00000479414 PMEPA1Q969W9 287 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
CCDC58-204ENST00000479414 PHF20L1A8MW92 1017 aa9.66□□□□□ -0.86
CCDC58-204ENST00000479414 KIF4AO95239 1232 aa9.66□□□□□ -0.86
CCDC58-204ENST00000479414 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
CCDC58-204ENST00000479414 HYAL2Q12891 473 aa9.66□□□□□ -0.86
CCDC58-204ENST00000479414 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
CCDC58-204ENST00000479414 ENAMQ9NRM1 1142 aa9.66□□□□□ -0.86
CCDC58-204ENST00000479414 LOC102724428A0A0B4J2F2 783 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 CES1P23141 567 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 SIK1P57059 783 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms