RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
PTPN18-210ENST00000479295 COL4A1P02462 1669 aa12.41□□□□□ -0.42
PTPN18-210ENST00000479295 RTL9Q8NET4 1388 aa12.41□□□□□ -0.42
PTPN18-210ENST00000479295 PTPRCP08575 1304 aa12.4□□□□□ -0.42
PTPN18-210ENST00000479295 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
PTPN18-210ENST00000479295 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
PTPN18-210ENST00000479295 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
PTPN18-210ENST00000479295 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
PTPN18-210ENST00000479295 F6X3S4 739 aa12.39□□□□□ -0.43
PTPN18-210ENST00000479295 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
PTPN18-210ENST00000479295 DDX46Q7L014 1031 aaKnown RBP12.39□□□□□ -0.43
PTPN18-210ENST00000479295 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
PTPN18-210ENST00000479295 UTYO14607 1347 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 CSF1RP07333 972 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN18-210ENST00000479295 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 CELF1Q92879 486 aaKnown RBP12.38□□□□□ -0.43
PTPN18-210ENST00000479295 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
PTPN18-210ENST00000479295 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
PTPN18-210ENST00000479295 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
PTPN18-210ENST00000479295 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
PTPN18-210ENST00000479295 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
PTPN18-210ENST00000479295 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
PTPN18-210ENST00000479295 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
PTPN18-210ENST00000479295 TAF1P21675 1872 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 COL4A5P29400 1685 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 KIF3CO14782 793 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
PTPN18-210ENST00000479295 CTSWP56202 376 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 RPS8P62241 208 aaKnown RBP12.36□□□□□ -0.43
PTPN18-210ENST00000479295 UBE3BQ7Z3V4 1068 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
PTPN18-210ENST00000479295 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
PTPN18-210ENST00000479295 MYH3P11055 1940 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 FZD9O00144 591 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 FOXO4P98177 505 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
PTPN18-210ENST00000479295 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
PTPN18-210ENST00000479295 GRM8O00222 908 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 MPNDQ8N594 471 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 GREM2Q9H772 168 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
PTPN18-210ENST00000479295 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
PTPN18-210ENST00000479295 POTECB2RU33 542 aa12.33□□□□□ -0.44
PTPN18-210ENST00000479295 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.44
PTPN18-210ENST00000479295 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
PTPN18-210ENST00000479295 NBPF7P0C2Y1 421 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
PTPN18-210ENST00000479295 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
PTPN18-210ENST00000479295 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 CDC5LQ99459 802 aaKnown RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
PTPN18-210ENST00000479295 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
PTPN18-210ENST00000479295 BSDC1Q9NW68 430 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-210ENST00000479295 GPSM2P81274 684 aa12.31□□□□□ -0.44
PTPN18-210ENST00000479295 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
PTPN18-210ENST00000479295 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
PTPN18-210ENST00000479295 KIF16BQ96L93 1317 aa12.31□□□□□ -0.44
PTPN18-210ENST00000479295 ITGA6P23229 1130 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
PTPN18-210ENST00000479295 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
PTPN18-210ENST00000479295 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
PTPN18-210ENST00000479295 POLLQ9UGP5 575 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
PTPN18-210ENST00000479295 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 TOMM70O94826 608 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 C1QTNF8P60827 252 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 GPC2Q8N158 579 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 LARGE2Q8N3Y3 721 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
PTPN18-210ENST00000479295 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
PTPN18-210ENST00000479295 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
PTPN18-210ENST00000479295 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
PTPN18-210ENST00000479295 BCAR3O75815 825 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
PTPN18-210ENST00000479295 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
PTPN18-210ENST00000479295 AOC3Q16853 763 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 LMBR1LQ6UX01 489 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
PTPN18-210ENST00000479295 XDHP47989 1333 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms