RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
SCAF8-206ENST00000479234 USP54Q70EL1 1684 aa7.78□□□□□ -1.16
SCAF8-206ENST00000479234 CEP170BQ9Y4F5 1589 aaPredicted RBP7.77□□□□□ -1.17
SCAF8-206ENST00000479234 MSH6P52701 1360 aa7.77□□□□□ -1.17
SCAF8-206ENST00000479234 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
SCAF8-206ENST00000479234 WNT7AO00755 349 aa7.77□□□□□ -1.17
SCAF8-206ENST00000479234 ZBTB24O43167 697 aaPredicted RBP7.77□□□□□ -1.17
SCAF8-206ENST00000479234 PSME1Q06323 249 aa7.77□□□□□ -1.17
SCAF8-206ENST00000479234 SLC4A10Q6U841 1118 aa7.77□□□□□ -1.17
SCAF8-206ENST00000479234 C16orf71Q8IYS4 520 aaPredicted RBP7.77□□□□□ -1.17
SCAF8-206ENST00000479234 FER1L4A9Z1Z3 1794 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 PIK3C2AO00443 1686 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 FMN2Q9NZ56 1722 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 F6X3S4 739 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 REC8O95072 547 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 SDSP20132 328 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 FKBP5Q13451 457 aaPredicted RBP7.76□□□□□ -1.17
SCAF8-206ENST00000479234 SKOR2Q2VWA4 1001 aaPredicted RBP7.76□□□□□ -1.17
SCAF8-206ENST00000479234 AMOTQ4VCS5 1084 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 PLEKHO1Q53GL0 409 aaPredicted RBP7.76□□□□□ -1.17
SCAF8-206ENST00000479234 GBP4Q96PP9 640 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 SRCIN1Q9C0H9 1055 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 PRDM9Q9NQV7 894 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 SLC27A5Q9Y2P5 690 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 NWD1Q149M9 1564 aa7.76□□□□□ -1.17
SCAF8-206ENST00000479234 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 EPB41L2O43491 1005 aaKnown RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 TRAK2O60296 914 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 RAB11FIP3O75154 756 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 PDE1AP54750 535 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 RAB3GAP1Q15042 981 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 NUTM2GQ5VZR2 741 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 BRICD5Q6PL45 260 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 CLEC17AQ6ZS10 378 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 SULF1Q8IWU6 871 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 SNIP1Q8TAD8 396 aaKnown RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 LTV1Q96GA3 475 aaPredicted RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 LRRCC1Q9C099 1032 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 CWC22Q9HCG8 908 aaKnown RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 ATP13A2Q9NQ11 1180 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 STAP2Q9UGK3 403 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 ISY1Q9ULR0 285 aaKnown RBP7.75□□□□□ -1.17
SCAF8-206ENST00000479234 ADGRL3Q9HAR2 1447 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 AOX1Q06278 1338 aa7.75□□□□□ -1.17
SCAF8-206ENST00000479234 ERC2O15083 957 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 SMPD1P17405 629 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 FECHP22830 423 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 EIF4A1P60842 406 aaKnown RBP7.74□□□□□ -1.17
SCAF8-206ENST00000479234 ESCO1Q5FWF5 840 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 NBPF6Q5VWK0 638 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 C14orf37Q86TY3 774 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 TRIM47Q96LD4 638 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 NBPF4Q96M43 638 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 SLC24A3Q9HC58 644 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 SALL3Q9BXA9 1300 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 PXDNLA1KZ92 1463 aa7.74□□□□□ -1.17
SCAF8-206ENST00000479234 FSD2A1L4K1 749 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 HSP90AA1P07900 732 aaKnown RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 UBTFL1P0CB47 393 aaPredicted RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 GCGRP47871 477 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 NUCB2P80303 420 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 TRIM32Q13049 653 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 ARHGEF25Q86VW2 580 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 OTUD7AQ8TE49 926 aaPredicted RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 SSH3Q8TE77 659 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 TNPO1Q92973 898 aaKnown RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 REPIN1Q9BWE0 567 aaKnown RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 USP44Q9H0E7 712 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 RGPD8O14715 1765 aaPredicted RBP7.73□□□□□ -1.17
SCAF8-206ENST00000479234 LRRC37A3O60309 1634 aa7.73□□□□□ -1.17
SCAF8-206ENST00000479234 IBTKQ9P2D0 1353 aaPredicted RBP7.72□□□□□ -1.17
SCAF8-206ENST00000479234 GOLGA6L3A6NEY3 463 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 RNMTO43148 476 aaKnown RBP7.72□□□□□ -1.17
SCAF8-206ENST00000479234 GCP02774 474 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 MCM2P49736 904 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 ANAPC15P60006 121 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 TEFQ10587 303 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 MAP2K5Q13163 448 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 IL17RAQ96F46 866 aa7.72□□□□□ -1.17
SCAF8-206ENST00000479234 CHD2O14647 1828 aaKnown RBP7.72□□□□□ -1.17
SCAF8-206ENST00000479234 OVOS2A0A0G2JMS6 1433 aa7.71□□□□□ -1.17
SCAF8-206ENST00000479234 NPHP4O75161 1426 aaPredicted RBP7.71□□□□□ -1.17
SCAF8-206ENST00000479234 PNMA6EA0A0J9YXQ4 647 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 BTBD11A6QL63 1104 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 GOLGA6L22H0YM25 854 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 APBB1O00213 710 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 MX1P20591 662 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 MCCP23508 829 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 C1orf141Q5JVX7 400 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
SCAF8-206ENST00000479234 ZNF530Q6P9A1 599 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms