RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 C9orf78Q9NZ63 289 aaPredicted RBP21.83■■□□□ 1.09
CDK11A-215ENST00000478901 CCT4P50991 539 aaKnown RBP21.81■■□□□ 1.08
CDK11A-215ENST00000478901 CTSWP56202 376 aa21.81■■□□□ 1.08
CDK11A-215ENST00000478901 ZKSCAN2Q63HK3 967 aa21.81■■□□□ 1.08
CDK11A-215ENST00000478901 TTLL11Q8NHH1 800 aa21.81■■□□□ 1.08
CDK11A-215ENST00000478901 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
CDK11A-215ENST00000478901 UTYO14607 1347 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 COL4A1P02462 1669 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 NBPF7P0C2Y1 421 aaPredicted RBP21.8■■□□□ 1.08
CDK11A-215ENST00000478901 GRAPQ13588 217 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 CCDC152Q4G0S7 254 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 OLFM4Q6UX06 510 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 GRAPLQ8TC17 118 aaPredicted RBP21.8■■□□□ 1.08
CDK11A-215ENST00000478901 CCDC85AQ96PX6 553 aaPredicted RBP21.8■■□□□ 1.08
CDK11A-215ENST00000478901 USP44Q9H0E7 712 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 CHD4Q14839 1912 aa21.8■■□□□ 1.08
CDK11A-215ENST00000478901 FOXO4P98177 505 aa21.79■■□□□ 1.08
CDK11A-215ENST00000478901 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
CDK11A-215ENST00000478901 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
CDK11A-215ENST00000478901 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
CDK11A-215ENST00000478901 FER1L6Q2WGJ9 1857 aa21.78■■□□□ 1.08
CDK11A-215ENST00000478901 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
CDK11A-215ENST00000478901 BBOX1O75936 387 aa21.78■■□□□ 1.08
CDK11A-215ENST00000478901 CSF1RP07333 972 aa21.78■■□□□ 1.08
CDK11A-215ENST00000478901 EPHA10Q5JZY3 1008 aa21.78■■□□□ 1.08
CDK11A-215ENST00000478901 INTS3Q68E01 1043 aaKnown RBP21.78■■□□□ 1.08
CDK11A-215ENST00000478901 NFKBIEO00221 500 aa21.77■■□□□ 1.08
CDK11A-215ENST00000478901 SOGA3Q5TF21 947 aa21.77■■□□□ 1.08
CDK11A-215ENST00000478901 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
CDK11A-215ENST00000478901 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
CDK11A-215ENST00000478901 GREM2Q9H772 168 aa21.77■■□□□ 1.08
CDK11A-215ENST00000478901 RASSF7Q02833 373 aa21.76■■□□□ 1.07
CDK11A-215ENST00000478901 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
CDK11A-215ENST00000478901 RTL9Q8NET4 1388 aa21.75■■□□□ 1.07
CDK11A-215ENST00000478901 SNED1Q8TER0 1413 aa21.75■■□□□ 1.07
CDK11A-215ENST00000478901 RPS8P62241 208 aaKnown RBP21.75■■□□□ 1.07
CDK11A-215ENST00000478901 ATP6V0A2Q9Y487 856 aa21.75■■□□□ 1.07
CDK11A-215ENST00000478901 SBF1O95248 1867 aa21.75■■□□□ 1.07
CDK11A-215ENST00000478901 PRELPP51888 382 aa21.74■■□□□ 1.07
CDK11A-215ENST00000478901 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
CDK11A-215ENST00000478901 SP8Q8IXZ3 490 aa21.74■■□□□ 1.07
CDK11A-215ENST00000478901 TMEM57Q8N5G2 664 aa21.74■■□□□ 1.07
CDK11A-215ENST00000478901 RLBP1P12271 317 aa21.73■■□□□ 1.07
CDK11A-215ENST00000478901 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
CDK11A-215ENST00000478901 LMBR1LQ6UX01 489 aa21.73■■□□□ 1.07
CDK11A-215ENST00000478901 DZIP1LQ8IYY4 767 aaKnown RBP21.73■■□□□ 1.07
CDK11A-215ENST00000478901 ITGA6P23229 1130 aa21.72■■□□□ 1.07
CDK11A-215ENST00000478901 TMC4Q7Z404 712 aa21.72■■□□□ 1.07
CDK11A-215ENST00000478901 RTKN2Q8IZC4 609 aa21.72■■□□□ 1.07
CDK11A-215ENST00000478901 MEIS3Q99687 375 aa21.72■■□□□ 1.07
CDK11A-215ENST00000478901 BICC1Q9H694 974 aaKnown RBP21.72■■□□□ 1.07
CDK11A-215ENST00000478901 LTBP3Q9NS15 1303 aa21.72■■□□□ 1.07
CDK11A-215ENST00000478901 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
CDK11A-215ENST00000478901 PLIN1O60240 522 aa21.71■■□□□ 1.07
CDK11A-215ENST00000478901 FTSJ3Q8IY81 847 aaKnown RBP21.71■■□□□ 1.07
CDK11A-215ENST00000478901 CDC5LQ99459 802 aaKnown RBP21.71■■□□□ 1.07
CDK11A-215ENST00000478901 TAOK3Q9H2K8 898 aa21.71■■□□□ 1.07
CDK11A-215ENST00000478901 LRRC37AA6NMS7 1700 aa21.7■■□□□ 1.06
CDK11A-215ENST00000478901 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
CDK11A-215ENST00000478901 FKBP4Q02790 459 aaKnown RBP eCLIP21.7■■□□□ 1.06
CDK11A-215ENST00000478901 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
CDK11A-215ENST00000478901 ANKRD18AQ8IVF6 992 aa21.7■■□□□ 1.06
CDK11A-215ENST00000478901 ANKRD44Q8N8A2 993 aa21.7■■□□□ 1.06
CDK11A-215ENST00000478901 CHMP3Q9Y3E7 222 aa21.7■■□□□ 1.06
CDK11A-215ENST00000478901 LMNB1P20700 586 aa21.69■■□□□ 1.06
CDK11A-215ENST00000478901 GRIPAP1Q4V328 841 aa21.69■■□□□ 1.06
CDK11A-215ENST00000478901 C9orf131Q5VYM1 1079 aa21.69■■□□□ 1.06
CDK11A-215ENST00000478901 PANK1Q8TE04 598 aa21.69■■□□□ 1.06
CDK11A-215ENST00000478901 TMX4Q9H1E5 349 aaPredicted RBP21.69■■□□□ 1.06
CDK11A-215ENST00000478901 SPEF2Q9C093 1822 aa21.69■■□□□ 1.06
CDK11A-215ENST00000478901 ANKRD18BA2A2Z9 1011 aa21.68■■□□□ 1.06
CDK11A-215ENST00000478901 IFIT5Q13325 482 aaKnown RBP21.68■■□□□ 1.06
CDK11A-215ENST00000478901 PSMD1Q99460 953 aa21.68■■□□□ 1.06
CDK11A-215ENST00000478901 YY1P25490 414 aa21.67■■□□□ 1.06
CDK11A-215ENST00000478901 ZNF277Q9NRM2 450 aaPredicted RBP21.67■■□□□ 1.06
CDK11A-215ENST00000478901 BSDC1Q9NW68 430 aaPredicted RBP21.67■■□□□ 1.06
CDK11A-215ENST00000478901 RNF181Q9P0P0 153 aa21.67■■□□□ 1.06
CDK11A-215ENST00000478901 GNAI3P08754 354 aa21.66■■□□□ 1.06
CDK11A-215ENST00000478901 IGHMBP2P38935 993 aaKnown RBP21.66■■□□□ 1.06
CDK11A-215ENST00000478901 CCDC57Q2TAC2 916 aa21.66■■□□□ 1.06
CDK11A-215ENST00000478901 MPNDQ8N594 471 aa21.66■■□□□ 1.06
CDK11A-215ENST00000478901 LRRFIP2Q9Y608 721 aaKnown RBP21.66■■□□□ 1.06
CDK11A-215ENST00000478901 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
CDK11A-215ENST00000478901 MS4A1P11836 297 aa21.65■■□□□ 1.06
CDK11A-215ENST00000478901 GPSM2P81274 684 aa21.65■■□□□ 1.06
CDK11A-215ENST00000478901 DPP8Q6V1X1 898 aaPredicted RBP21.65■■□□□ 1.06
CDK11A-215ENST00000478901 ITPRIPQ8IWB1 547 aa21.65■■□□□ 1.06
CDK11A-215ENST00000478901 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
CDK11A-215ENST00000478901 RTFDC1Q9BY42 306 aaPredicted RBP21.65■■□□□ 1.06
CDK11A-215ENST00000478901 MINPP1Q9UNW1 487 aa21.64■■□□□ 1.05
CDK11A-215ENST00000478901 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
CDK11A-215ENST00000478901 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.05
CDK11A-215ENST00000478901 DUOX1Q9NRD9 1551 aa21.64■■□□□ 1.05
CDK11A-215ENST00000478901 LTBP1Q14766 1721 aa21.63■■□□□ 1.05
CDK11A-215ENST00000478901 ZBTB7BO15156 539 aaPredicted RBP21.63■■□□□ 1.05
CDK11A-215ENST00000478901 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
CDK11A-215ENST00000478901 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
CDK11A-215ENST00000478901 MPHOSPH8Q99549 860 aa21.63■■□□□ 1.05
CDK11A-215ENST00000478901 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms