RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 RTL5Q5HYW3 569 aaPredicted RBP12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 TMC4Q7Z404 712 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
SCAMP3-206ENST00000478737 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
SCAMP3-206ENST00000478737 CASP7P55210 303 aa12.68□□□□□ -0.38
SCAMP3-206ENST00000478737 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
SCAMP3-206ENST00000478737 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
SCAMP3-206ENST00000478737 F6X3S4 739 aa12.67□□□□□ -0.38
SCAMP3-206ENST00000478737 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
SCAMP3-206ENST00000478737 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-206ENST00000478737 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-206ENST00000478737 VPS33BQ9H267 617 aa12.67□□□□□ -0.38
SCAMP3-206ENST00000478737 PTPRCP08575 1304 aa12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 ALDH1L1O75891 902 aa12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 CCDC152Q4G0S7 254 aa12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 TTLL11Q8NHH1 800 aa12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 CELF1Q92879 486 aaKnown RBP12.66□□□□□ -0.38
SCAMP3-206ENST00000478737 KIF3CO14782 793 aa12.65□□□□□ -0.38
SCAMP3-206ENST00000478737 CSF1RP07333 972 aa12.65□□□□□ -0.38
SCAMP3-206ENST00000478737 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
SCAMP3-206ENST00000478737 TMX4Q9H1E5 349 aaPredicted RBP12.65□□□□□ -0.38
SCAMP3-206ENST00000478737 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
SCAMP3-206ENST00000478737 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 FZD9O00144 591 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 CTSWP56202 376 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 DPY19L2Q6NUT2 758 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 SEC31BQ9NQW1 1179 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
SCAMP3-206ENST00000478737 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 MPNDQ8N594 471 aa12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 SBF1O95248 1867 aa12.63□□□□□ -0.39
SCAMP3-206ENST00000478737 UTYO14607 1347 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 POTECB2RU33 542 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 GRM8O00222 908 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 FOXO4P98177 505 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
SCAMP3-206ENST00000478737 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 KIAA2012Q0VF49 1180 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 GREM2Q9H772 168 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
SCAMP3-206ENST00000478737 TOMM70O94826 608 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
SCAMP3-206ENST00000478737 DDNO94850 711 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 GPSM2P81274 684 aa12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 CCDC85AQ96PX6 553 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 POLLQ9UGP5 575 aa12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
SCAMP3-206ENST00000478737 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 TAF1P21675 1872 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 ITGA6P23229 1130 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 AOC3Q16853 763 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 GPC2Q8N158 579 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 TBC1D16Q8TBP0 767 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 ZNF541Q9H0D2 1346 aa12.58□□□□□ -0.4
SCAMP3-206ENST00000478737 CCT4P50991 539 aaKnown RBP12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 COL4A1P02462 1669 aa12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 COL4A5P29400 1685 aa12.57□□□□□ -0.4
SCAMP3-206ENST00000478737 ANKRD18BA2A2Z9 1011 aa12.56□□□□□ -0.4
SCAMP3-206ENST00000478737 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
SCAMP3-206ENST00000478737 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms