RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 LTBP3Q9NS15 1303 aa20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 BBOX1O75936 387 aa20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 LMNB1P20700 586 aa20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 CTSWP56202 376 aa20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 API5Q9BZZ5 524 aaKnown RBP20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
PDZRN3-207ENST00000478209 GRIPAP1Q4V328 841 aa20.8■□□□□ 0.92
PDZRN3-207ENST00000478209 TMC4Q7Z404 712 aa20.8■□□□□ 0.92
PDZRN3-207ENST00000478209 C9orf78Q9NZ63 289 aaPredicted RBP20.8■□□□□ 0.92
PDZRN3-207ENST00000478209 MYH3P11055 1940 aa20.8■□□□□ 0.92
PDZRN3-207ENST00000478209 SBF1O95248 1867 aa20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 GRM8O00222 908 aa20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 ATP6V0A2Q9Y487 856 aa20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 GOLGB1Q14789 3259 aaKnown RBP20.79■□□□□ 0.92
PDZRN3-207ENST00000478209 CASP7P55210 303 aa20.78■□□□□ 0.92
PDZRN3-207ENST00000478209 FKBP4Q02790 459 aaKnown RBP eCLIP20.78■□□□□ 0.92
PDZRN3-207ENST00000478209 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
PDZRN3-207ENST00000478209 IPO8O15397 1037 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-207ENST00000478209 SP8Q8IXZ3 490 aa20.77■□□□□ 0.92
PDZRN3-207ENST00000478209 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-207ENST00000478209 TAF1P21675 1872 aa20.77■□□□□ 0.92
PDZRN3-207ENST00000478209 CCDC88AQ3V6T2 1871 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 BCAR3O75815 825 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 ARHGAP45Q92619 1136 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 PSMD1Q99460 953 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 SEC31BQ9NQW1 1179 aa20.76■□□□□ 0.91
PDZRN3-207ENST00000478209 CCT4P50991 539 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 RPS8P62241 208 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 FRAT1Q92837 279 aaPredicted RBP20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 CDC5LQ99459 802 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
PDZRN3-207ENST00000478209 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
PDZRN3-207ENST00000478209 PRELPP51888 382 aa20.74■□□□□ 0.91
PDZRN3-207ENST00000478209 ANKRD18AQ8IVF6 992 aa20.74■□□□□ 0.91
PDZRN3-207ENST00000478209 ZC3H4Q9UPT8 1303 aaKnown RBP20.74■□□□□ 0.91
PDZRN3-207ENST00000478209 UTRNP46939 3433 aa20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 MPNDQ8N594 471 aa20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 GREM2Q9H772 168 aa20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
PDZRN3-207ENST00000478209 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-207ENST00000478209 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
PDZRN3-207ENST00000478209 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
PDZRN3-207ENST00000478209 DICER1Q9UPY3 1922 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-207ENST00000478209 UTYO14607 1347 aa20.72■□□□□ 0.91
PDZRN3-207ENST00000478209 COL4A1P02462 1669 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 CSF1RP07333 972 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 NBPF7P0C2Y1 421 aaPredicted RBP20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 IARSP41252 1262 aaKnown RBP20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 ZKSCAN2Q63HK3 967 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 CHMP3Q9Y3E7 222 aa20.71■□□□□ 0.91
PDZRN3-207ENST00000478209 TRIM27P14373 513 aa20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 ITGA6P23229 1130 aa20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 FOXO4P98177 505 aa20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 ZNF526Q8TF50 670 aaPredicted RBP20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
PDZRN3-207ENST00000478209 ANKRD18BA2A2Z9 1011 aa20.69■□□□□ 0.9
PDZRN3-207ENST00000478209 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
PDZRN3-207ENST00000478209 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
PDZRN3-207ENST00000478209 GPBP1L1Q9HC44 474 aaPredicted RBP20.69■□□□□ 0.9
PDZRN3-207ENST00000478209 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
PDZRN3-207ENST00000478209 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
PDZRN3-207ENST00000478209 RTFDC1Q9BY42 306 aaPredicted RBP20.68■□□□□ 0.9
PDZRN3-207ENST00000478209 NSFL1CQ9UNZ2 370 aaKnown RBP20.68■□□□□ 0.9
PDZRN3-207ENST00000478209 PPIP5K2O43314 1243 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 LARGE2Q8N3Y3 721 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 VPS33BQ9H267 617 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 BSDC1Q9NW68 430 aaPredicted RBP20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 KDM2BQ8NHM5 1336 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
PDZRN3-207ENST00000478209 UBTFL1P0CB47 393 aaPredicted RBP20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 GPSM2P81274 684 aa20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 CLUAP1Q96AJ1 413 aa20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 MPHOSPH8Q99549 860 aa20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 HDAC5Q9UQL6 1122 aa20.66■□□□□ 0.9
PDZRN3-207ENST00000478209 TAF7LQ5H9L4 462 aa20.65■□□□□ 0.9
PDZRN3-207ENST00000478209 DPY19L2Q6NUT2 758 aa20.65■□□□□ 0.9
PDZRN3-207ENST00000478209 BICC1Q9H694 974 aaKnown RBP20.65■□□□□ 0.9
PDZRN3-207ENST00000478209 ANKIB1Q9P2G1 1089 aa20.65■□□□□ 0.9
PDZRN3-207ENST00000478209 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
PDZRN3-207ENST00000478209 DUOX1Q9NRD9 1551 aa20.64■□□□□ 0.9
PDZRN3-207ENST00000478209 XDHP47989 1333 aa20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 C6orf229H3BNL8 230 aa20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 AOC3Q16853 763 aa20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 FTSJ3Q8IY81 847 aaKnown RBP20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 KAZALD1Q96I82 304 aa20.64■□□□□ 0.89
PDZRN3-207ENST00000478209 EYA3Q99504 573 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms