RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
LMNA-214ENST00000478063 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
LMNA-214ENST00000478063 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
LMNA-214ENST00000478063 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
LMNA-214ENST00000478063 A0A1B0GUL6 1792 aa16.53■□□□□ 0.24
LMNA-214ENST00000478063 POLRMTO00411 1230 aaKnown RBP16.52■□□□□ 0.24
LMNA-214ENST00000478063 CSF1RP07333 972 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
LMNA-214ENST00000478063 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 ILDR2Q71H61 639 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 CCDC24Q8N4L8 307 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
LMNA-214ENST00000478063 MMP10P09238 476 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
LMNA-214ENST00000478063 ST5P78524 1137 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 NUCB1Q02818 461 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 SIL1Q9H173 461 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 GREM2Q9H772 168 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 LRP5O75197 1615 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
LMNA-214ENST00000478063 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
LMNA-214ENST00000478063 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
LMNA-214ENST00000478063 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
LMNA-214ENST00000478063 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
LMNA-214ENST00000478063 ITGA6P23229 1130 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
LMNA-214ENST00000478063 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.235e-10■■□□□ 12.5
LMNA-214ENST00000478063 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
LMNA-214ENST00000478063 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
LMNA-214ENST00000478063 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
LMNA-214ENST00000478063 SMARCA5O60264 1052 aaPredicted RBP16.48■□□□□ 0.23
LMNA-214ENST00000478063 RGS3P49796 1198 aa16.48■□□□□ 0.23
LMNA-214ENST00000478063 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
LMNA-214ENST00000478063 RTL9Q8NET4 1388 aa16.48■□□□□ 0.23
LMNA-214ENST00000478063 COL4A1P02462 1669 aa16.47■□□□□ 0.23
LMNA-214ENST00000478063 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
LMNA-214ENST00000478063 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
LMNA-214ENST00000478063 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
LMNA-214ENST00000478063 R3HDM1Q15032 1099 aaKnown RBP16.46■□□□□ 0.23
LMNA-214ENST00000478063 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
LMNA-214ENST00000478063 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
LMNA-214ENST00000478063 EYA2O00167 538 aa16.45■□□□□ 0.22
LMNA-214ENST00000478063 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
LMNA-214ENST00000478063 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
LMNA-214ENST00000478063 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
LMNA-214ENST00000478063 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
LMNA-214ENST00000478063 CIAO1O76071 339 aa16.44■□□□□ 0.22
LMNA-214ENST00000478063 PDE4AP27815 886 aa16.44■□□□□ 0.22
LMNA-214ENST00000478063 CDC5LQ99459 802 aaKnown RBP16.44■□□□□ 0.22
LMNA-214ENST00000478063 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
LMNA-214ENST00000478063 SASH1O94885 1247 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
LMNA-214ENST00000478063 IL15P40933 162 aaPredicted RBP16.43■□□□□ 0.22
LMNA-214ENST00000478063 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
LMNA-214ENST00000478063 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
LMNA-214ENST00000478063 PSDA5PKW4 1024 aaPredicted RBP16.42■□□□□ 0.22
LMNA-214ENST00000478063 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
LMNA-214ENST00000478063 TFCP2Q12800 502 aa16.42■□□□□ 0.22
LMNA-214ENST00000478063 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
LMNA-214ENST00000478063 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
LMNA-214ENST00000478063 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
LMNA-214ENST00000478063 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
LMNA-214ENST00000478063 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
LMNA-214ENST00000478063 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
LMNA-214ENST00000478063 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
LMNA-214ENST00000478063 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
LMNA-214ENST00000478063 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
LMNA-214ENST00000478063 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
LMNA-214ENST00000478063 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
LMNA-214ENST00000478063 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
LMNA-214ENST00000478063 MTFR1LQ9H019 292 aa16.4■□□□□ 0.22
LMNA-214ENST00000478063 ZNF609O15014 1411 aa16.39■□□□□ 0.21
LMNA-214ENST00000478063 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
LMNA-214ENST00000478063 PDE6BP35913 854 aa16.39■□□□□ 0.21
LMNA-214ENST00000478063 AACSQ86V21 672 aa16.39■□□□□ 0.21
LMNA-214ENST00000478063 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
LMNA-214ENST00000478063 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
LMNA-214ENST00000478063 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
LMNA-214ENST00000478063 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
LMNA-214ENST00000478063 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms