RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-208ENST00000477928 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-208ENST00000477928 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
SOX2-OT-208ENST00000477928 FZD9O00144 591 aa17.71■□□□□ 0.43
SOX2-OT-208ENST00000477928 VAMP4O75379 141 aa17.71■□□□□ 0.43
SOX2-OT-208ENST00000477928 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-208ENST00000477928 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
SOX2-OT-208ENST00000477928 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 KSR2Q6VAB6 950 aa17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
SOX2-OT-208ENST00000477928 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
SOX2-OT-208ENST00000477928 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-208ENST00000477928 E9PSI1 815 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 BBOX1O75936 387 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 TAF1P21675 1872 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 FSTL1Q12841 308 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 FLIIQ13045 1269 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 GJA3Q9Y6H8 435 aa17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-208ENST00000477928 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
SOX2-OT-208ENST00000477928 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-208ENST00000477928 NEURL1BA8MQ27 555 aa17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 F6X3S4 739 aa17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 APLP1P51693 650 aa17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 GPSM2P81274 684 aa17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 MPNDQ8N594 471 aa17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
SOX2-OT-208ENST00000477928 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-208ENST00000477928 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
SOX2-OT-208ENST00000477928 DNAJC5GQ8N7S2 189 aa17.65■□□□□ 0.42
SOX2-OT-208ENST00000477928 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 SCNN1DP51172 638 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
SOX2-OT-208ENST00000477928 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 PDE8AO60658 829 aa17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 EPS15P42566 896 aa17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 GPC2Q8N158 579 aa17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 TMX4Q9H1E5 349 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
SOX2-OT-208ENST00000477928 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 RAD17O75943 681 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 EPHX2P34913 555 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 CTSWP56202 376 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 CXCL9Q07325 125 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 HACL1Q9UJ83 578 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
SOX2-OT-208ENST00000477928 SHTN1A0MZ66 631 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 IQCA1LA6NCM1 817 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 CASP7P55210 303 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 SLFN5Q08AF3 891 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 GCKRQ14397 625 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 GREM2Q9H772 168 aa17.61■□□□□ 0.41
SOX2-OT-208ENST00000477928 H7C1W4 665 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 ZNRF3Q9ULT6 936 aa17.6■□□□□ 0.41
SOX2-OT-208ENST00000477928 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 MAP1SQ66K74 1059 aaPredicted RBP17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
SOX2-OT-208ENST00000477928 GMPSP49915 693 aaPredicted RBP17.58■□□□□ 0.4
SOX2-OT-208ENST00000477928 BEND3Q5T5X7 828 aa17.58■□□□□ 0.4
SOX2-OT-208ENST00000477928 TRMT2AQ8IZ69 625 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-208ENST00000477928 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
SOX2-OT-208ENST00000477928 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
SOX2-OT-208ENST00000477928 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
SOX2-OT-208ENST00000477928 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
SOX2-OT-208ENST00000477928 BCL2L13Q9BXK5 485 aa17.57■□□□□ 0.4
SOX2-OT-208ENST00000477928 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
SOX2-OT-208ENST00000477928 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms