RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 CREB3L3Q68CJ9 461 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 VSIG10Q8N0Z9 540 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 MAP4K1Q92918 833 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 ISCA1Q9BUE6 129 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 LIMCH1Q9UPQ0 1083 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 TM6SF1Q9BZW5 370 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
HLA-DMB-260ENST00000477537 STARD3NLO95772 234 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 MRE11P49959 708 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 ZNF594Q96JF6 807 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 CHAMP1Q96JM3 812 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 HAUS7Q99871 368 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 CYP46A1Q9Y6A2 500 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
HLA-DMB-260ENST00000477537 SLC27A2O14975 620 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 SPATA31A5Q5VU36 1347 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 SPATA31A7Q8IWB4 1347 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 EYA2O00167 538 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 LRRC24Q50LG9 513 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
HLA-DMB-260ENST00000477537 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 EXOC5O00471 708 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 RNF20Q5VTR2 975 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 BCL9O00512 1426 aa13.22□□□□□ -0.29
HLA-DMB-260ENST00000477537 TAF5LO75529 589 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 CIAO1O76071 339 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 LARGE1O95461 756 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 PSMA5P28066 241 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 VPS72Q15906 364 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 RPAP1Q9BWH6 1393 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-260ENST00000477537 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 TIMM10P62072 90 aa13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 MAP3K15Q6ZN16 1313 aa13.21□□□□□ -0.3
HLA-DMB-260ENST00000477537 ZNF609O15014 1411 aa13.2□□□□□ -0.3
HLA-DMB-260ENST00000477537 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
HLA-DMB-260ENST00000477537 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-260ENST00000477537 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
HLA-DMB-260ENST00000477537 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
HLA-DMB-260ENST00000477537 CHGBP05060 677 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 GPT2Q8TD30 523 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 QTRT2Q9H974 415 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 GOLIM4O00461 696 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 HLFQ16534 295 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 PLA2G12BQ9BX93 195 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 PAG1Q9NWQ8 432 aa13.19□□□□□ -0.3
HLA-DMB-260ENST00000477537 A0A0G2JS52 829 aa13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 GPTP24298 496 aa13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
HLA-DMB-260ENST00000477537 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms