RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 FAM155AB1AL88 458 aaPredicted RBP14.97□□□□□ -0.01
LSM2-212ENST00000477182 HOXA10P31260 410 aaPredicted RBP14.97□□□□□ -0.01
LSM2-212ENST00000477182 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
LSM2-212ENST00000477182 HPS5Q9UPZ3 1129 aa14.97□□□□□ -0.01
LSM2-212ENST00000477182 USP16Q9Y5T5 823 aa14.97□□□□□ -0.01
LSM2-212ENST00000477182 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
LSM2-212ENST00000477182 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
LSM2-212ENST00000477182 PIP4K2AP48426 406 aaPredicted RBP14.96□□□□□ -0.01
LSM2-212ENST00000477182 KIF23Q02241 960 aaPredicted RBP14.96□□□□□ -0.01
LSM2-212ENST00000477182 CXCL9Q07325 125 aa14.96□□□□□ -0.01
LSM2-212ENST00000477182 HABP4Q5JVS0 413 aaKnown RBP14.96□□□□□ -0.01
LSM2-212ENST00000477182 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
LSM2-212ENST00000477182 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
LSM2-212ENST00000477182 SUPT20HQ8NEM7 779 aa14.96□□□□□ -0.01
LSM2-212ENST00000477182 RBM17Q96I25 401 aaKnown RBP14.96□□□□□ -0.01
LSM2-212ENST00000477182 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
LSM2-212ENST00000477182 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
LSM2-212ENST00000477182 TNIP1Q15025 636 aa14.95□□□□□ -0.02
LSM2-212ENST00000477182 AOC3Q16853 763 aa14.95□□□□□ -0.02
LSM2-212ENST00000477182 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
LSM2-212ENST00000477182 CRAMP1Q96RY5 1269 aa14.95□□□□□ -0.02
LSM2-212ENST00000477182 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
LSM2-212ENST00000477182 KDM3BQ7LBC6 1761 aa14.94□□□□□ -0.02
LSM2-212ENST00000477182 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 ZNF157P51786 506 aaPredicted RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 HIRAP54198 1017 aaPredicted RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 GOLGA2Q08379 1002 aa14.94□□□□□ -0.02
LSM2-212ENST00000477182 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
LSM2-212ENST00000477182 GBA2Q9HCG7 927 aaPredicted RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
LSM2-212ENST00000477182 IL16Q14005 1332 aa14.93□□□□□ -0.02
LSM2-212ENST00000477182 H7C1D1 291 aa14.93□□□□□ -0.02
LSM2-212ENST00000477182 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
LSM2-212ENST00000477182 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
LSM2-212ENST00000477182 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
LSM2-212ENST00000477182 HLFQ16534 295 aa14.92□□□□□ -0.02
LSM2-212ENST00000477182 NUTM1Q86Y26 1132 aa14.92□□□□□ -0.02
LSM2-212ENST00000477182 TRPM4Q8TD43 1214 aa14.92□□□□□ -0.02
LSM2-212ENST00000477182 CSRNP1Q96S65 589 aa14.92□□□□□ -0.02
LSM2-212ENST00000477182 CNOT7Q9UIV1 285 aaKnown RBP14.92□□□□□ -0.02
LSM2-212ENST00000477182 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
LSM2-212ENST00000477182 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
LSM2-212ENST00000477182 KCNQ3O43525 872 aa14.91□□□□□ -0.02
LSM2-212ENST00000477182 SLC10A3P09131 477 aa14.91□□□□□ -0.02
LSM2-212ENST00000477182 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
LSM2-212ENST00000477182 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
LSM2-212ENST00000477182 RTFDC1Q9BY42 306 aaPredicted RBP14.91□□□□□ -0.02
LSM2-212ENST00000477182 IFT57Q9NWB7 429 aa14.91□□□□□ -0.02
LSM2-212ENST00000477182 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
LSM2-212ENST00000477182 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
LSM2-212ENST00000477182 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 E9PSI1 815 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 ZNF853P0CG23 659 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 GNAI1P63096 354 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
LSM2-212ENST00000477182 KRT26Q7Z3Y9 468 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 MIS18AQ9NYP9 233 aa14.9□□□□□ -0.02
LSM2-212ENST00000477182 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
LSM2-212ENST00000477182 PRAMEF22A3QJZ6 481 aa14.89□□□□□ -0.03
LSM2-212ENST00000477182 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
LSM2-212ENST00000477182 RAD17O75943 681 aa14.89□□□□□ -0.03
LSM2-212ENST00000477182 TSR2Q969E8 191 aaKnown RBP14.89□□□□□ -0.03
LSM2-212ENST00000477182 NUP98P52948 1817 aa14.89□□□□□ -0.03
LSM2-212ENST00000477182 CHL1O00533 1208 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 KIAA2012Q0VF49 1180 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 DPP8Q6V1X1 898 aaPredicted RBP14.88□□□□□ -0.03
LSM2-212ENST00000477182 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 DPF2Q92785 391 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
LSM2-212ENST00000477182 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 MBIPQ9NS73 344 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 TSPYL4Q9UJ04 414 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
LSM2-212ENST00000477182 FBXO46Q6PJ61 603 aaPredicted RBP14.87□□□□□ -0.03
LSM2-212ENST00000477182 TRMT2AQ8IZ69 625 aaKnown RBP14.87□□□□□ -0.03
LSM2-212ENST00000477182 DUSP27Q5VZP5 1158 aa14.86□□□□□ -0.03
LSM2-212ENST00000477182 MPNDQ8N594 471 aa14.86□□□□□ -0.03
LSM2-212ENST00000477182 NLRP3Q96P20 1036 aa14.86□□□□□ -0.03
LSM2-212ENST00000477182 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
LSM2-212ENST00000477182 BBOX1O75936 387 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 FXR1P51114 621 aaKnown RBP eCLIP14.85□□□□□ -0.03
LSM2-212ENST00000477182 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
LSM2-212ENST00000477182 DLK2Q6UY11 383 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 SP8Q8IXZ3 490 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
LSM2-212ENST00000477182 MAP3K15Q6ZN16 1313 aa14.85□□□□□ -0.03
LSM2-212ENST00000477182 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
LSM2-212ENST00000477182 SUSD4Q5VX71 490 aa14.84□□□□□ -0.03
LSM2-212ENST00000477182 SAMD7Q7Z3H4 446 aa14.84□□□□□ -0.03
LSM2-212ENST00000477182 PPP1R42Q7Z4L9 355 aa14.84□□□□□ -0.03
LSM2-212ENST00000477182 ADM5C9JUS6 153 aa14.83□□□□□ -0.04
LSM2-212ENST00000477182 GPTP24298 496 aa14.83□□□□□ -0.04
LSM2-212ENST00000477182 RPS12P25398 132 aaKnown RBP14.83□□□□□ -0.04
LSM2-212ENST00000477182 EXOSC9Q06265 439 aaKnown RBP14.83□□□□□ -0.04
LSM2-212ENST00000477182 KRT24Q2M2I5 525 aa14.83□□□□□ -0.04
LSM2-212ENST00000477182 TBC1D10BQ4KMP7 808 aaPredicted RBP14.83□□□□□ -0.04
LSM2-212ENST00000477182 RASAL3Q86YV0 1011 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms