RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 PASKQ96RG2 1323 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
APTX-221ENST00000477119 EPS15P42566 896 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
APTX-221ENST00000477119 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 MYD88Q99836 296 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
APTX-221ENST00000477119 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
APTX-221ENST00000477119 SCNN1DP51172 638 aa17.3■□□□□ 0.36
APTX-221ENST00000477119 CXCL9Q07325 125 aa17.3■□□□□ 0.36
APTX-221ENST00000477119 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
APTX-221ENST00000477119 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
APTX-221ENST00000477119 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
APTX-221ENST00000477119 SCN4AP35499 1836 aa17.3■□□□□ 0.36
APTX-221ENST00000477119 ANKRD36CQ5JPF3 1778 aa17.3■□□□□ 0.36
APTX-221ENST00000477119 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
APTX-221ENST00000477119 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
APTX-221ENST00000477119 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
APTX-221ENST00000477119 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
APTX-221ENST00000477119 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
APTX-221ENST00000477119 NSFL1CQ9UNZ2 370 aaKnown RBP17.29■□□□□ 0.36
APTX-221ENST00000477119 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
APTX-221ENST00000477119 ANP32CO43423 234 aa17.28■□□□□ 0.36
APTX-221ENST00000477119 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
APTX-221ENST00000477119 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
APTX-221ENST00000477119 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
APTX-221ENST00000477119 METTL22Q9BUU2 404 aaPredicted RBP17.27■□□□□ 0.36
APTX-221ENST00000477119 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
APTX-221ENST00000477119 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.36
APTX-221ENST00000477119 RAD17O75943 681 aa17.26■□□□□ 0.35
APTX-221ENST00000477119 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 CIAPIN1Q6FI81 312 aa17.26■□□□□ 0.35
APTX-221ENST00000477119 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
APTX-221ENST00000477119 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
APTX-221ENST00000477119 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
APTX-221ENST00000477119 C6orf229H3BNL8 230 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
APTX-221ENST00000477119 GPSM2P81274 684 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 TNIP1Q15025 636 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 WASHC4Q2M389 1173 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
APTX-221ENST00000477119 COL13A1Q5TAT6 717 aaPredicted RBP17.25■□□□□ 0.35
APTX-221ENST00000477119 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
APTX-221ENST00000477119 ADARB2Q9NS39 739 aaKnown RBP17.25■□□□□ 0.35
APTX-221ENST00000477119 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
APTX-221ENST00000477119 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 BCL2L13Q9BXK5 485 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 LAMB2P55268 1798 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 CNTNAP1P78357 1384 aa17.24■□□□□ 0.35
APTX-221ENST00000477119 IL16Q14005 1332 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 YDJCA8MPS7 323 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 PDE8AO60658 829 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
APTX-221ENST00000477119 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
APTX-221ENST00000477119 LTBP1Q14766 1721 aa17.22■□□□□ 0.35
APTX-221ENST00000477119 VEGFBP49765 207 aa17.22■□□□□ 0.35
APTX-221ENST00000477119 FMR1Q06787 632 aaKnown RBP eCLIP17.22■□□□□ 0.35
APTX-221ENST00000477119 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
APTX-221ENST00000477119 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
APTX-221ENST00000477119 G2E3Q7L622 706 aa17.22■□□□□ 0.35
APTX-221ENST00000477119 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
APTX-221ENST00000477119 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
APTX-221ENST00000477119 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
APTX-221ENST00000477119 TRAF5O00463 557 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 IGKV5-2P06315 115 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 NEXNQ0ZGT2 675 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 TBC1D16Q8TBP0 767 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
APTX-221ENST00000477119 EYA3Q99504 573 aa17.21■□□□□ 0.35
APTX-221ENST00000477119 DEFB115Q30KQ5 88 aa17.2■□□□□ 0.34
APTX-221ENST00000477119 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
APTX-221ENST00000477119 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
APTX-221ENST00000477119 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
APTX-221ENST00000477119 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
APTX-221ENST00000477119 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
APTX-221ENST00000477119 COL4A1P02462 1669 aa17.2■□□□□ 0.34
APTX-221ENST00000477119 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
APTX-221ENST00000477119 TAF1P21675 1872 aa17.19■□□□□ 0.34
APTX-221ENST00000477119 H7C1D1 291 aa17.19■□□□□ 0.34
APTX-221ENST00000477119 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
APTX-221ENST00000477119 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
APTX-221ENST00000477119 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
APTX-221ENST00000477119 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
APTX-221ENST00000477119 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
APTX-221ENST00000477119 G3V3G9 751 aa17.18■□□□□ 0.34
APTX-221ENST00000477119 PSMD14O00487 310 aa17.18■□□□□ 0.34
APTX-221ENST00000477119 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms