RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 BMP2KLQ5H9B9 411 aa35.53■■■■□ 3.28
VEGFA-211ENST00000476772 GREM2Q9H772 168 aa35.53■■■■□ 3.28
VEGFA-211ENST00000476772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.53■■■■□ 3.28
VEGFA-211ENST00000476772 TFCP2L1Q9NZI6 479 aa35.52■■■■□ 3.28
VEGFA-211ENST00000476772 MX1P20591 662 aa35.52■■■■□ 3.28
VEGFA-211ENST00000476772 IFIT5Q13325 482 aaKnown RBP35.52■■■■□ 3.28
VEGFA-211ENST00000476772 CLASRPQ8N2M8 674 aaKnown RBP35.52■■■■□ 3.28
VEGFA-211ENST00000476772 OSBPL3Q9H4L5 887 aa35.52■■■■□ 3.28
VEGFA-211ENST00000476772 EN1Q05925 392 aaPredicted RBP35.51■■■■□ 3.28
VEGFA-211ENST00000476772 ERFEQ4G0M1 354 aa35.51■■■■□ 3.28
VEGFA-211ENST00000476772 TTC22Q5TAA0 569 aa35.51■■■■□ 3.28
VEGFA-211ENST00000476772 CAMKK2Q96RR4 588 aa35.51■■■■□ 3.28
VEGFA-211ENST00000476772 HSP90B1P14625 803 aaKnown RBP35.5■■■■□ 3.27
VEGFA-211ENST00000476772 EZH2Q15910 746 aaKnown RBP35.5■■■■□ 3.27
VEGFA-211ENST00000476772 GYS1P13807 737 aa35.49■■■■□ 3.27
VEGFA-211ENST00000476772 GSPT1P15170 499 aaKnown RBP35.49■■■■□ 3.27
VEGFA-211ENST00000476772 ITGA6P23229 1130 aa35.49■■■■□ 3.27
VEGFA-211ENST00000476772 NYXQ9GZU5 481 aa35.49■■■■□ 3.27
VEGFA-211ENST00000476772 NFIXQ14938 502 aa35.48■■■■□ 3.27
VEGFA-211ENST00000476772 TSHZ3Q63HK5 1081 aa35.48■■■■□ 3.27
VEGFA-211ENST00000476772 ATG9AQ7Z3C6 839 aa35.48■■■■□ 3.27
VEGFA-211ENST00000476772 NBPF5PQ86XG9 351 aaPredicted RBP35.48■■■■□ 3.27
VEGFA-211ENST00000476772 STAP2Q9UGK3 403 aa35.48■■■■□ 3.27
VEGFA-211ENST00000476772 EYA2O00167 538 aa35.47■■■■□ 3.27
VEGFA-211ENST00000476772 LRRC24Q50LG9 513 aa35.47■■■■□ 3.27
VEGFA-211ENST00000476772 ABCC12Q96J65 1359 aa35.47■■■■□ 3.27
VEGFA-211ENST00000476772 ANKRD18BA2A2Z9 1011 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 TFCP2Q12800 502 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 TAF7LQ5H9L4 462 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 CARMIL3Q8ND23 1372 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 CIAO1O76071 339 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 GTF2E1P29083 439 aaPredicted RBP35.46■■■■□ 3.27
VEGFA-211ENST00000476772 AACSQ86V21 672 aa35.46■■■■□ 3.27
VEGFA-211ENST00000476772 PUS3Q9BZE2 481 aaKnown RBP35.46■■■■□ 3.27
VEGFA-211ENST00000476772 CASZ1Q86V15 1759 aa35.45■■■■□ 3.27
VEGFA-211ENST00000476772 IL15P40933 162 aaPredicted RBP35.45■■■■□ 3.27
VEGFA-211ENST00000476772 EAF2Q96CJ1 260 aaPredicted RBP35.45■■■■□ 3.27
VEGFA-211ENST00000476772 SF3B2Q13435 895 aaKnown RBP35.44■■■■□ 3.26
VEGFA-211ENST00000476772 TPTE2Q6XPS3 522 aa35.43■■■■□ 3.26
VEGFA-211ENST00000476772 FBXO3Q9UK99 471 aa35.43■■■■□ 3.26
VEGFA-211ENST00000476772 IFIT2P09913 472 aaKnown RBP35.43■■■■□ 3.26
VEGFA-211ENST00000476772 CCDC152Q4G0S7 254 aa35.43■■■■□ 3.26
VEGFA-211ENST00000476772 SLC10A5Q5PT55 438 aa35.43■■■■□ 3.26
VEGFA-211ENST00000476772 COL23A1Q86Y22 540 aaPredicted RBP35.43■■■■□ 3.26
VEGFA-211ENST00000476772 AOX1Q06278 1338 aa35.42■■■■□ 3.26
VEGFA-211ENST00000476772 RBM19Q9Y4C8 960 aaKnown RBP35.41■■■■□ 3.26
VEGFA-211ENST00000476772 LRP5O75197 1615 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 RTL9Q8NET4 1388 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 BAG6P46379 1132 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 C3orf67Q6ZVT6 689 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 TNNI3KQ59H18 835 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 FLAD1Q8NFF5 587 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 CCDC8Q9H0W5 538 aaPredicted RBP35.4■■■■□ 3.26
VEGFA-211ENST00000476772 FPGT-TNNI3KV9GXZ4 949 aa35.4■■■■□ 3.26
VEGFA-211ENST00000476772 ANO8Q9HCE9 1232 aaPredicted RBP35.39■■■■□ 3.26
VEGFA-211ENST00000476772 PNPLA7Q6ZV29 1317 aa35.39■■■■□ 3.26
VEGFA-211ENST00000476772 MSH5O43196 834 aa35.38■■■■□ 3.25
VEGFA-211ENST00000476772 DEFB132Q7Z7B7 95 aa35.38■■■■□ 3.25
VEGFA-211ENST00000476772 CCDC24Q8N4L8 307 aa35.38■■■■□ 3.25
VEGFA-211ENST00000476772 SEC31BQ9NQW1 1179 aa35.38■■■■□ 3.25
VEGFA-211ENST00000476772 TLR7Q9NYK1 1049 aaKnown RBP35.38■■■■□ 3.25
VEGFA-211ENST00000476772 TM4SF1P30408 202 aa35.37■■■■□ 3.25
VEGFA-211ENST00000476772 LDHAL6AQ6ZMR3 332 aa35.37■■■■□ 3.25
VEGFA-211ENST00000476772 PI4K2BQ8TCG2 481 aa35.37■■■■□ 3.25
VEGFA-211ENST00000476772 TTC41PQ6P2S7 1318 aa35.37■■■■□ 3.25
VEGFA-211ENST00000476772 SDSP20132 328 aa35.37■■■■□ 3.25
VEGFA-211ENST00000476772 SF3B3Q15393 1217 aaKnown RBP35.37■■■■□ 3.25
VEGFA-211ENST00000476772 NPHP1O15259 732 aa35.36■■■■□ 3.25
VEGFA-211ENST00000476772 RIPOR2Q9Y4F9 1068 aa35.35■■■■□ 3.25
VEGFA-211ENST00000476772 RIC1Q4ADV7 1423 aa35.35■■■■□ 3.25
VEGFA-211ENST00000476772 CNBD1Q8NA66 436 aa35.34■■■■□ 3.25
VEGFA-211ENST00000476772 GPATCH3Q96I76 525 aa35.34■■■■□ 3.25
VEGFA-211ENST00000476772 GPR108Q9NPR9 543 aa35.34■■■■□ 3.25
VEGFA-211ENST00000476772 CNNM1Q9NRU3 951 aa35.34■■■■□ 3.25
VEGFA-211ENST00000476772 ECHDC1Q9NTX5 307 aa35.34■■■■□ 3.25
VEGFA-211ENST00000476772 TNRC6CQ9HCJ0 1690 aaKnown RBP35.34■■■■□ 3.25
VEGFA-211ENST00000476772 SLC15A2Q16348 729 aa35.33■■■■□ 3.25
VEGFA-211ENST00000476772 CEP126Q9P2H0 1117 aa35.33■■■■□ 3.25
VEGFA-211ENST00000476772 SPEF2Q9C093 1822 aa35.33■■■■□ 3.25
VEGFA-211ENST00000476772 ZNF609O15014 1411 aa35.33■■■■□ 3.25
VEGFA-211ENST00000476772 NLRP3Q96P20 1036 aa35.33■■■■□ 3.25
VEGFA-211ENST00000476772 SEC24BO95487 1268 aa35.32■■■■□ 3.24
VEGFA-211ENST00000476772 DDR1Q08345 913 aa35.32■■■■□ 3.24
VEGFA-211ENST00000476772 STK32BQ9NY57 414 aa35.32■■■■□ 3.24
VEGFA-211ENST00000476772 DBNLQ9UJU6 430 aaKnown RBP35.32■■■■□ 3.24
VEGFA-211ENST00000476772 COL4A1P02462 1669 aa35.32■■■■□ 3.24
VEGFA-211ENST00000476772 SERPINB2P05120 415 aa35.31■■■■□ 3.24
VEGFA-211ENST00000476772 PRR5LQ6MZQ0 368 aa35.31■■■■□ 3.24
VEGFA-211ENST00000476772 QSER1Q2KHR3 1735 aa35.3■■■■□ 3.24
VEGFA-211ENST00000476772 POLRMTO00411 1230 aaKnown RBP35.3■■■■□ 3.24
VEGFA-211ENST00000476772 ERC2O15083 957 aa35.3■■■■□ 3.24
VEGFA-211ENST00000476772 CDC45O75419 566 aa35.3■■■■□ 3.24
VEGFA-211ENST00000476772 GLRX3O76003 335 aaKnown RBP35.3■■■■□ 3.24
VEGFA-211ENST00000476772 METTL24Q5JXM2 366 aa35.3■■■■□ 3.24
VEGFA-211ENST00000476772 NLGN1Q8N2Q7 840 aa35.29■■■■□ 3.24
VEGFA-211ENST00000476772 DBNDD2Q9BQY9 259 aa35.29■■■■□ 3.24
VEGFA-211ENST00000476772 MPHOSPH8Q99549 860 aa35.28■■■■□ 3.24
VEGFA-211ENST00000476772 IGHMBP2P38935 993 aaKnown RBP35.27■■■■□ 3.24
VEGFA-211ENST00000476772 TBC1D9Q6ZT07 1266 aa35.27■■■■□ 3.24
VEGFA-211ENST00000476772 CDC5LQ99459 802 aaKnown RBP35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms