RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 GRAPQ13588 217 aa19.08■□□□□ 0.64
DFFA-203ENST00000476658 RTKN2Q8IZC4 609 aa19.08■□□□□ 0.64
DFFA-203ENST00000476658 GRAPLQ8TC17 118 aaPredicted RBP19.08■□□□□ 0.64
DFFA-203ENST00000476658 TIAM2Q8IVF5 1701 aa19.08■□□□□ 0.64
DFFA-203ENST00000476658 LTBP3Q9NS15 1303 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 BBOX1O75936 387 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 PRELPP51888 382 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 CCDC152Q4G0S7 254 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 CCDC85AQ96PX6 553 aaPredicted RBP19.07■□□□□ 0.64
DFFA-203ENST00000476658 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
DFFA-203ENST00000476658 RARSP54136 660 aaKnown RBP19.06■□□□□ 0.64
DFFA-203ENST00000476658 FKBP4Q02790 459 aaKnown RBP eCLIP19.06■□□□□ 0.64
DFFA-203ENST00000476658 ZNF526Q8TF50 670 aaPredicted RBP19.06■□□□□ 0.64
DFFA-203ENST00000476658 ALDH1L1O75891 902 aa19.05■□□□□ 0.64
DFFA-203ENST00000476658 CTSWP56202 376 aa19.05■□□□□ 0.64
DFFA-203ENST00000476658 SLC51AQ86UW1 340 aa19.05■□□□□ 0.64
DFFA-203ENST00000476658 CELF1Q92879 486 aaKnown RBP19.05■□□□□ 0.64
DFFA-203ENST00000476658 ATP6V0A2Q9Y487 856 aa19.05■□□□□ 0.64
DFFA-203ENST00000476658 GRIPAP1Q4V328 841 aa19.04■□□□□ 0.64
DFFA-203ENST00000476658 SEC31BQ9NQW1 1179 aa19.04■□□□□ 0.64
DFFA-203ENST00000476658 C9orf78Q9NZ63 289 aaPredicted RBP19.04■□□□□ 0.64
DFFA-203ENST00000476658 NOB1Q9ULX3 412 aaKnown RBP19.04■□□□□ 0.64
DFFA-203ENST00000476658 SPEF2Q9C093 1822 aa19.04■□□□□ 0.64
DFFA-203ENST00000476658 GRM8O00222 908 aa19.03■□□□□ 0.64
DFFA-203ENST00000476658 CASP7P55210 303 aa19.03■□□□□ 0.64
DFFA-203ENST00000476658 TMC4Q7Z404 712 aa19.03■□□□□ 0.64
DFFA-203ENST00000476658 SP8Q8IXZ3 490 aa19.03■□□□□ 0.64
DFFA-203ENST00000476658 ZNF277Q9NRM2 450 aaPredicted RBP19.03■□□□□ 0.64
DFFA-203ENST00000476658 COL4A1P02462 1669 aa19.03■□□□□ 0.64
DFFA-203ENST00000476658 SNED1Q8TER0 1413 aa19.02■□□□□ 0.64
DFFA-203ENST00000476658 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
DFFA-203ENST00000476658 RPS8P62241 208 aaKnown RBP19.02■□□□□ 0.64
DFFA-203ENST00000476658 TTLL11Q8NHH1 800 aa19.02■□□□□ 0.64
DFFA-203ENST00000476658 PSMD1Q99460 953 aa19.02■□□□□ 0.64
DFFA-203ENST00000476658 PLA2G12BQ9BX93 195 aa19.02■□□□□ 0.64
DFFA-203ENST00000476658 GPBP1L1Q9HC44 474 aaPredicted RBP19.02■□□□□ 0.64
DFFA-203ENST00000476658 LRRC37AA6NMS7 1700 aa19.02■□□□□ 0.63
DFFA-203ENST00000476658 KIF16BQ96L93 1317 aa19.01■□□□□ 0.63
DFFA-203ENST00000476658 API5Q9BZZ5 524 aaKnown RBP19.01■□□□□ 0.63
DFFA-203ENST00000476658 ZC3H4Q9UPT8 1303 aaKnown RBP19■□□□□ 0.63
DFFA-203ENST00000476658 IARSP41252 1262 aaKnown RBP19■□□□□ 0.63
DFFA-203ENST00000476658 DPP8Q6V1X1 898 aaPredicted RBP19■□□□□ 0.63
DFFA-203ENST00000476658 MPNDQ8N594 471 aa19■□□□□ 0.63
DFFA-203ENST00000476658 GREM2Q9H772 168 aa19■□□□□ 0.63
DFFA-203ENST00000476658 BCAR3O75815 825 aa18.99■□□□□ 0.63
DFFA-203ENST00000476658 ANKRD18AQ8IVF6 992 aa18.99■□□□□ 0.63
DFFA-203ENST00000476658 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
DFFA-203ENST00000476658 CDC5LQ99459 802 aaKnown RBP18.99■□□□□ 0.63
DFFA-203ENST00000476658 RTL9Q8NET4 1388 aa18.98■□□□□ 0.63
DFFA-203ENST00000476658 CHMP3Q9Y3E7 222 aa18.98■□□□□ 0.63
DFFA-203ENST00000476658 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
DFFA-203ENST00000476658 NBPF7P0C2Y1 421 aaPredicted RBP18.97■□□□□ 0.63
DFFA-203ENST00000476658 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
DFFA-203ENST00000476658 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
DFFA-203ENST00000476658 SUPT20HQ8NEM7 779 aa18.97■□□□□ 0.63
DFFA-203ENST00000476658 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
DFFA-203ENST00000476658 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
DFFA-203ENST00000476658 PPIP5K2O43314 1243 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 CSF1RP07333 972 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 ITGA6P23229 1130 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 FOXO4P98177 505 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 LARGE2Q8N3Y3 721 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 ARHGAP45Q92619 1136 aa18.96■□□□□ 0.63
DFFA-203ENST00000476658 IGHMBP2P38935 993 aaKnown RBP18.95■□□□□ 0.62
DFFA-203ENST00000476658 GPSM2P81274 684 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 EPHA10Q5JZY3 1008 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 DPY19L2Q6NUT2 758 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 LMBR1LQ6UX01 489 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 JDP2Q8WYK2 163 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 SUCLG2Q96I99 432 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 RTFDC1Q9BY42 306 aaPredicted RBP18.95■□□□□ 0.62
DFFA-203ENST00000476658 UTYO14607 1347 aa18.95■□□□□ 0.62
DFFA-203ENST00000476658 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
DFFA-203ENST00000476658 AOC3Q16853 763 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 USP44Q9H0E7 712 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 ANKIB1Q9P2G1 1089 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 LTBP1Q14766 1721 aa18.94■□□□□ 0.62
DFFA-203ENST00000476658 DUOX1Q9NRD9 1551 aa18.93■□□□□ 0.62
DFFA-203ENST00000476658 C6orf229H3BNL8 230 aa18.93■□□□□ 0.62
DFFA-203ENST00000476658 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
DFFA-203ENST00000476658 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
DFFA-203ENST00000476658 NMRK2Q9NPI5 230 aa18.93■□□□□ 0.62
DFFA-203ENST00000476658 BSDC1Q9NW68 430 aaPredicted RBP18.93■□□□□ 0.62
DFFA-203ENST00000476658 COL4A5P29400 1685 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 TRIM27P14373 513 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 CCDC57Q2TAC2 916 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 NIM1KQ8IY84 436 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 VPS33BQ9H267 617 aa18.92■□□□□ 0.62
DFFA-203ENST00000476658 BICC1Q9H694 974 aaKnown RBP18.92■□□□□ 0.62
DFFA-203ENST00000476658 TAF7LQ5H9L4 462 aa18.91■□□□□ 0.62
DFFA-203ENST00000476658 CLUAP1Q96AJ1 413 aa18.91■□□□□ 0.62
DFFA-203ENST00000476658 KAZALD1Q96I82 304 aa18.91■□□□□ 0.62
DFFA-203ENST00000476658 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
DFFA-203ENST00000476658 POLLQ9UGP5 575 aa18.91■□□□□ 0.62
DFFA-203ENST00000476658 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
DFFA-203ENST00000476658 FZD9O00144 591 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms