RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 COL4A1P02462 1669 aa22.95■■□□□ 1.26
RAPGEF3-208ENST00000476259 G2E3Q7L622 706 aa22.95■■□□□ 1.26
RAPGEF3-208ENST00000476259 SP8Q8IXZ3 490 aa22.95■■□□□ 1.26
RAPGEF3-208ENST00000476259 SMC1BQ8NDV3 1235 aa22.95■■□□□ 1.26
RAPGEF3-208ENST00000476259 CWC25Q9NXE8 425 aaPredicted RBP22.95■■□□□ 1.26
RAPGEF3-208ENST00000476259 FZD9O00144 591 aa22.94■■□□□ 1.26
RAPGEF3-208ENST00000476259 VAMP4O75379 141 aa22.94■■□□□ 1.26
RAPGEF3-208ENST00000476259 MYH16Q9H6N6 1097 aa22.94■■□□□ 1.26
RAPGEF3-208ENST00000476259 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
RAPGEF3-208ENST00000476259 LARGE2Q8N3Y3 721 aa22.93■■□□□ 1.26
RAPGEF3-208ENST00000476259 CEP350Q5VT06 3117 aa22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 HSP90B1P14625 803 aaKnown RBP22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 APLP1P51693 650 aa22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 NEXNQ0ZGT2 675 aa22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 DPP8Q6V1X1 898 aaPredicted RBP22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 TMC4Q7Z404 712 aa22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 L3MBTL3Q96JM7 780 aaPredicted RBP22.92■■□□□ 1.26
RAPGEF3-208ENST00000476259 PPIP5K2O43314 1243 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 IGKV5-2P06315 115 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 FLIIQ13045 1269 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 MPNDQ8N594 471 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 SUPT20HQ8NEM7 779 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 JARID2Q92833 1246 aaPredicted RBP22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 CELF1Q92879 486 aaKnown RBP22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 SPEF2Q9C093 1822 aa22.91■■□□□ 1.26
RAPGEF3-208ENST00000476259 IQCA1LA6NCM1 817 aa22.9■■□□□ 1.26
RAPGEF3-208ENST00000476259 EIF6P56537 245 aaKnown RBP22.9■■□□□ 1.26
RAPGEF3-208ENST00000476259 RTFDC1Q9BY42 306 aaPredicted RBP22.9■■□□□ 1.26
RAPGEF3-208ENST00000476259 ZNF521Q96K83 1311 aa22.89■■□□□ 1.26
RAPGEF3-208ENST00000476259 LTBP1Q14766 1721 aa22.89■■□□□ 1.26
RAPGEF3-208ENST00000476259 PDE8AO60658 829 aa22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 FKBP5Q13451 457 aaPredicted RBP22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 AOC3Q16853 763 aa22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 NIM1KQ8IY84 436 aa22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 GPC2Q8N158 579 aa22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 VPS33BQ9H267 617 aa22.89■■□□□ 1.25
RAPGEF3-208ENST00000476259 CDHR2Q9BYE9 1310 aa22.88■■□□□ 1.25
RAPGEF3-208ENST00000476259 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
RAPGEF3-208ENST00000476259 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
RAPGEF3-208ENST00000476259 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
RAPGEF3-208ENST00000476259 TAF1DQ9H5J8 278 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF3-208ENST00000476259 SEC31BQ9NQW1 1179 aa22.86■■□□□ 1.25
RAPGEF3-208ENST00000476259 GJA3Q9Y6H8 435 aa22.86■■□□□ 1.25
RAPGEF3-208ENST00000476259 ADAMTSL1Q8N6G6 1762 aa22.86■■□□□ 1.25
RAPGEF3-208ENST00000476259 POTEIP0CG38 1075 aa22.85■■□□□ 1.25
RAPGEF3-208ENST00000476259 POTEJP0CG39 1038 aa22.85■■□□□ 1.25
RAPGEF3-208ENST00000476259 RPS8P62241 208 aaKnown RBP22.85■■□□□ 1.25
RAPGEF3-208ENST00000476259 DNAAF4Q8WXU2 420 aa22.85■■□□□ 1.25
RAPGEF3-208ENST00000476259 HACL1Q9UJ83 578 aa22.85■■□□□ 1.25
RAPGEF3-208ENST00000476259 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
RAPGEF3-208ENST00000476259 CCDC85AQ96PX6 553 aaPredicted RBP22.84■■□□□ 1.25
RAPGEF3-208ENST00000476259 NSFL1CQ9UNZ2 370 aaKnown RBP22.84■■□□□ 1.25
RAPGEF3-208ENST00000476259 CCER2I3L3R5 266 aa22.83■■□□□ 1.25
RAPGEF3-208ENST00000476259 CHADLQ6NUI6 762 aa22.83■■□□□ 1.25
RAPGEF3-208ENST00000476259 EPHX2P34913 555 aa22.82■■□□□ 1.24
RAPGEF3-208ENST00000476259 CTSWP56202 376 aa22.82■■□□□ 1.24
RAPGEF3-208ENST00000476259 HTRA3P83110 453 aa22.82■■□□□ 1.24
RAPGEF3-208ENST00000476259 UBE3BQ7Z3V4 1068 aa22.82■■□□□ 1.24
RAPGEF3-208ENST00000476259 ZNRF3Q9ULT6 936 aa22.82■■□□□ 1.24
RAPGEF3-208ENST00000476259 H7C1W4 665 aa22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 GPSM2P81274 684 aa22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 GCKRQ14397 625 aa22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 EAPPQ56P03 285 aaPredicted RBP22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 LDHDQ86WU2 507 aa22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 LINS1Q8NG48 757 aa22.81■■□□□ 1.24
RAPGEF3-208ENST00000476259 LMOD1P29536 600 aaPredicted RBP22.8■■□□□ 1.24
RAPGEF3-208ENST00000476259 E9PSI1 815 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 F6X3S4 739 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 C6orf229H3BNL8 230 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 CXCL9Q07325 125 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 WASHC4Q2M389 1173 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 PNMA8AQ86V59 439 aaPredicted RBP22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 TTLL11Q8NHH1 800 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 POLLQ9UGP5 575 aa22.79■■□□□ 1.24
RAPGEF3-208ENST00000476259 SCNN1DP51172 638 aa22.78■■□□□ 1.24
RAPGEF3-208ENST00000476259 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
RAPGEF3-208ENST00000476259 RIMBP2O15034 1052 aa22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 TBC1D16Q8TBP0 767 aa22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 CDC5LQ99459 802 aaKnown RBP22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 EYA3Q99504 573 aa22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 GREM2Q9H772 168 aa22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 CLEC11AQ9Y240 323 aa22.77■■□□□ 1.24
RAPGEF3-208ENST00000476259 RTL9Q8NET4 1388 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 EPS15P42566 896 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 CASP7P55210 303 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 CIAPIN1Q6FI81 312 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 PODXL2Q9NZ53 605 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 ANKIB1Q9P2G1 1089 aa22.76■■□□□ 1.23
RAPGEF3-208ENST00000476259 YDJCA8MPS7 323 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 RAD17O75943 681 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 BEND3Q5T5X7 828 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 GPR101Q96P66 508 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 PLA2G12BQ9BX93 195 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 DBNDD1Q9H9R9 158 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 PSME4Q14997 1843 aa22.75■■□□□ 1.23
RAPGEF3-208ENST00000476259 UFL1O94874 794 aa22.74■■□□□ 1.23
RAPGEF3-208ENST00000476259 TNIP1Q15025 636 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms