RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KRT76Q01546 638 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 LYSMD3Q7Z3D4 306 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 MPHOSPH9Q99550 1183 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 GRIP2Q9C0E4 1043 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 TRPM3Q9HCF6 1732 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-206ENST00000476045 TULP4Q9NRJ4 1543 aa6.12□□□□□ -1.43
VPS13D-206ENST00000476045 CRYBG1Q9Y4K1 1723 aa6.11□□□□□ -1.43
VPS13D-206ENST00000476045 ALS2Q96Q42 1657 aa6.11□□□□□ -1.43
VPS13D-206ENST00000476045 TNS3Q68CZ2 1445 aa6.11□□□□□ -1.43
VPS13D-206ENST00000476045 VAC14Q08AM6 782 aa6.11□□□□□ -1.43
VPS13D-206ENST00000476045 GPR161Q8N6U8 529 aaKnown RBP6.11□□□□□ -1.43
VPS13D-206ENST00000476045 CDCA7Q9BWT1 371 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-206ENST00000476045 RGS12O14924 1447 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 DHX57Q6P158 1386 aaKnown RBP6.1□□□□□ -1.43
VPS13D-206ENST00000476045 AFF2P51816 1311 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 IL2RAP01589 272 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 FLIIQ13045 1269 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 POTEAQ6S8J7 498 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 ZSCAN1Q8NBB4 408 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 SIRT1Q96EB6 747 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 ARXQ96QS3 562 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 FHDC1Q9C0D6 1143 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-206ENST00000476045 NRAPQ86VF7 1730 aa6.1□□□□□ -1.43
VPS13D-206ENST00000476045 ATP7BP35670 1465 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ATRNO75882 1429 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 COL14A1Q05707 1796 aaKnown RBP6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ADGRF5Q8IZF2 1346 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 WASLO00401 505 aaPredicted RBP6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ABL2P42684 1182 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 MAP7D1Q3KQU3 841 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 NFATC2IPQ8NCF5 419 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 XAGE2Q96GT9 111 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ESYT1Q9BSJ8 1104 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ALG2Q9H553 416 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 ARHGEF10LQ9HCE6 1279 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 DOLKQ9UPQ8 538 aa6.09□□□□□ -1.43
VPS13D-206ENST00000476045 SBNO1A3KN83 1393 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 QRICH2Q9H0J4 1663 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 PHRF1Q9P1Y6 1649 aaKnown RBP6.08□□□□□ -1.44
VPS13D-206ENST00000476045 MYCP01106 439 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-206ENST00000476045 RXRBP28702 533 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 SLFNL1Q499Z3 407 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 RNF135Q8IUD6 432 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
VPS13D-206ENST00000476045 SLURP2P0DP57 97 aa6.07□□□□□ -1.44
VPS13D-206ENST00000476045 RBM6P78332 1123 aaKnown RBP6.07□□□□□ -1.44
VPS13D-206ENST00000476045 TSGA10IPQ3SY00 556 aa6.07□□□□□ -1.44
VPS13D-206ENST00000476045 NBPF10Q6P3W6 841 aaKnown RBP6.07□□□□□ -1.44
VPS13D-206ENST00000476045 NBPF15Q8N660 670 aa6.07□□□□□ -1.44
VPS13D-206ENST00000476045 POM121Q96HA1 1249 aa6.07□□□□□ -1.44
VPS13D-206ENST00000476045 C14orf93Q9H972 538 aaKnown RBP6.07□□□□□ -1.44
VPS13D-206ENST00000476045 CUEDC1Q9NWM3 386 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-206ENST00000476045 SLIT2O94813 1529 aa6.07□□□□□ -1.44
VPS13D-206ENST00000476045 SRCAPQ6ZRS2 3230 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 RGPD1P0DJD0 1748 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 MEN1O00255 615 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 SCNN1DP51172 638 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 USP4Q13107 963 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 RNFT1Q5M7Z0 435 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 TRIM22Q8IYM9 498 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 PLPP7Q8NBV4 271 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 CNKSR1Q969H4 720 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 ZNF837Q96EG3 531 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-206ENST00000476045 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 ETNK1Q9HBU6 452 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 TRPC5Q9UL62 973 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-206ENST00000476045 BRWD3Q6RI45 1802 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 GLI3P10071 1580 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 PLEKHH1Q9ULM0 1364 aa6.06□□□□□ -1.44
VPS13D-206ENST00000476045 SPATA31A3Q5VYP0 1347 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 PSME1Q06323 249 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 GAS6Q14393 721 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 SV2AQ7L0J3 742 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 PRICKLE2Q7Z3G6 844 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 ZNF295-AS1Q8N0V1 137 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 FNBP4Q8N3X1 1017 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-206ENST00000476045 NLRP3Q96P20 1036 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 ORAI2Q96SN7 254 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 COL25A1Q9BXS0 654 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-206ENST00000476045 TRPM1Q7Z4N2 1603 aa6.05□□□□□ -1.44
VPS13D-206ENST00000476045 BCL9LQ86UU0 1499 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 FAM181BA6NEQ2 426 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 LZTS3O60299 673 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-206ENST00000476045 RHOQP17081 205 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 TAS1R3Q7RTX0 852 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 ADAMTS19Q8TE59 1207 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 RAB6BQ9NRW1 208 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 STK26Q9P289 416 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 NRKQ7Z2Y5 1582 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 GPRASP1Q5JY77 1395 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 THSD7AQ9UPZ6 1657 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 WNK3Q9BYP7 1800 aa6.04□□□□□ -1.44
VPS13D-206ENST00000476045 RALGAPBQ86X10 1494 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms