RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 CHL1O00533 1208 aa16.23■□□□□ 0.19
CCDC57-208ENST00000475635 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
CCDC57-208ENST00000475635 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
CCDC57-208ENST00000475635 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
CCDC57-208ENST00000475635 DUOX1Q9NRD9 1551 aa16.22■□□□□ 0.19
CCDC57-208ENST00000475635 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-208ENST00000475635 MAP2K1Q02750 393 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-208ENST00000475635 GRAPQ13588 217 aa16.22■□□□□ 0.19
CCDC57-208ENST00000475635 CST9Q5W186 159 aa16.22■□□□□ 0.19
CCDC57-208ENST00000475635 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-208ENST00000475635 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-208ENST00000475635 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
CCDC57-208ENST00000475635 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
CCDC57-208ENST00000475635 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
CCDC57-208ENST00000475635 CASP8AP2Q9UKL3 1982 aa16.21■□□□□ 0.19
CCDC57-208ENST00000475635 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
CCDC57-208ENST00000475635 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
CCDC57-208ENST00000475635 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
CCDC57-208ENST00000475635 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
CCDC57-208ENST00000475635 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
CCDC57-208ENST00000475635 ECE1P42892 770 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 GRM1Q13255 1194 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 CYP4F22Q6NT55 531 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 PLBD2Q8NHP8 589 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
CCDC57-208ENST00000475635 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
CCDC57-208ENST00000475635 RAD17O75943 681 aa16.19■□□□□ 0.18
CCDC57-208ENST00000475635 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
CCDC57-208ENST00000475635 TNIP1Q15025 636 aa16.19■□□□□ 0.18
CCDC57-208ENST00000475635 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCDC57-208ENST00000475635 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
CCDC57-208ENST00000475635 TLL2Q9Y6L7 1015 aa16.19■□□□□ 0.18
CCDC57-208ENST00000475635 SCN9AQ15858 1988 aa16.18■□□□□ 0.18
CCDC57-208ENST00000475635 COL4A1P02462 1669 aa16.18■□□□□ 0.18
CCDC57-208ENST00000475635 HOXB7P09629 217 aa16.18■□□□□ 0.18
CCDC57-208ENST00000475635 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
CCDC57-208ENST00000475635 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
CCDC57-208ENST00000475635 GPR101Q96P66 508 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-208ENST00000475635 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-208ENST00000475635 YDJCA8MPS7 323 aa16.17■□□□□ 0.18
CCDC57-208ENST00000475635 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
CCDC57-208ENST00000475635 CELF2O95319 508 aaKnown RBP16.17■□□□□ 0.18
CCDC57-208ENST00000475635 FAM89AQ96GI7 184 aa16.17■□□□□ 0.18
CCDC57-208ENST00000475635 ISCA1Q9BUE6 129 aa16.17■□□□□ 0.18
CCDC57-208ENST00000475635 BEGAINQ9BUH8 593 aa16.17■□□□□ 0.18
CCDC57-208ENST00000475635 GLIS2Q9BZE0 524 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-208ENST00000475635 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
CCDC57-208ENST00000475635 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
CCDC57-208ENST00000475635 ZC3H15Q8WU90 426 aaKnown RBP16.16■□□□□ 0.18
CCDC57-208ENST00000475635 CELF1Q92879 486 aaKnown RBP16.16■□□□□ 0.18
CCDC57-208ENST00000475635 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
CCDC57-208ENST00000475635 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
CCDC57-208ENST00000475635 PSME4Q14997 1843 aa16.16■□□□□ 0.18
CCDC57-208ENST00000475635 MYH3P11055 1940 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 AOC2O75106 756 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
CCDC57-208ENST00000475635 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
CCDC57-208ENST00000475635 SAPCD2Q86UD0 394 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
CCDC57-208ENST00000475635 CNOT7Q9UIV1 285 aaKnown RBP16.15■□□□□ 0.18
CCDC57-208ENST00000475635 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
CCDC57-208ENST00000475635 AKAP11Q9UKA4 1901 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 WASHC4Q2M389 1173 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 ZNF408Q9H9D4 720 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
CCDC57-208ENST00000475635 H7C1D1 291 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 PSMD14O00487 310 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 MAP2K2P36507 400 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
CCDC57-208ENST00000475635 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-208ENST00000475635 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
CCDC57-208ENST00000475635 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
CCDC57-208ENST00000475635 GPSM2P81274 684 aa16.12■□□□□ 0.17
CCDC57-208ENST00000475635 HHIPL1Q96JK4 782 aa16.12■□□□□ 0.17
CCDC57-208ENST00000475635 POLLQ9UGP5 575 aa16.12■□□□□ 0.17
CCDC57-208ENST00000475635 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
CCDC57-208ENST00000475635 TRIM28Q13263 835 aaKnown RBP16.11■□□□□ 0.17
CCDC57-208ENST00000475635 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
CCDC57-208ENST00000475635 DPF2Q92785 391 aa16.11■□□□□ 0.17
CCDC57-208ENST00000475635 ECE2O60344 883 aa16.1■□□□□ 0.17
CCDC57-208ENST00000475635 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
CCDC57-208ENST00000475635 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
CCDC57-208ENST00000475635 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
CCDC57-208ENST00000475635 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
CCDC57-208ENST00000475635 EYA3Q99504 573 aa16.1■□□□□ 0.17
CCDC57-208ENST00000475635 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
CCDC57-208ENST00000475635 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
CCDC57-208ENST00000475635 TBC1D10BQ4KMP7 808 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-208ENST00000475635 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-208ENST00000475635 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
CCDC57-208ENST00000475635 PHAXQ9H814 394 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms