RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 AOC3Q16853 763 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 LDHDQ86WU2 507 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 WWC1Q8IX03 1113 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
CLIP2-204ENST00000474962 COL4A5P29400 1685 aa15.25■□□□□ 0.03
CLIP2-204ENST00000474962 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
CLIP2-204ENST00000474962 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-204ENST00000474962 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLIP2-204ENST00000474962 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
CLIP2-204ENST00000474962 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
CLIP2-204ENST00000474962 EPS15P42566 896 aa15.24■□□□□ 0.03
CLIP2-204ENST00000474962 GRAPQ13588 217 aa15.24■□□□□ 0.03
CLIP2-204ENST00000474962 DPP8Q6V1X1 898 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-204ENST00000474962 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
CLIP2-204ENST00000474962 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
CLIP2-204ENST00000474962 MPNDQ8N594 471 aa15.24■□□□□ 0.03
CLIP2-204ENST00000474962 GRAPLQ8TC17 118 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-204ENST00000474962 JARID2Q92833 1246 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-204ENST00000474962 RTFDC1Q9BY42 306 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-204ENST00000474962 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
CLIP2-204ENST00000474962 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
CLIP2-204ENST00000474962 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-204ENST00000474962 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
CLIP2-204ENST00000474962 MYD88Q99836 296 aa15.23■□□□□ 0.03
CLIP2-204ENST00000474962 PASKQ96RG2 1323 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 IRS4O14654 1257 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-204ENST00000474962 SCNN1DP51172 638 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 CXCL9Q07325 125 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-204ENST00000474962 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 ZNRF3Q9ULT6 936 aa15.22■□□□□ 0.03
CLIP2-204ENST00000474962 TAF1P21675 1872 aa15.21■□□□□ 0.03
CLIP2-204ENST00000474962 CCDC30Q5VVM6 783 aa15.21■□□□□ 0.03
CLIP2-204ENST00000474962 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
CLIP2-204ENST00000474962 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
CLIP2-204ENST00000474962 MKRN1Q9UHC7 482 aaKnown RBP15.21■□□□□ 0.03
CLIP2-204ENST00000474962 IL16Q14005 1332 aa15.2■□□□□ 0.02
CLIP2-204ENST00000474962 SCN4AP35499 1836 aa15.2■□□□□ 0.02
CLIP2-204ENST00000474962 RAD17O75943 681 aa15.2■□□□□ 0.02
CLIP2-204ENST00000474962 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
CLIP2-204ENST00000474962 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
CLIP2-204ENST00000474962 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
CLIP2-204ENST00000474962 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-204ENST00000474962 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
CLIP2-204ENST00000474962 KIAA2012Q0VF49 1180 aa15.19■□□□□ 0.02
CLIP2-204ENST00000474962 METTL22Q9BUU2 404 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-204ENST00000474962 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
CLIP2-204ENST00000474962 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
CLIP2-204ENST00000474962 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 TMEM88BA6NKF7 163 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 GPSM2P81274 684 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLIP2-204ENST00000474962 COL13A1Q5TAT6 717 aaPredicted RBP15.18■□□□□ 0.02
CLIP2-204ENST00000474962 G2E3Q7L622 706 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
CLIP2-204ENST00000474962 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 LAMB2P55268 1798 aa15.18■□□□□ 0.02
CLIP2-204ENST00000474962 YDJCA8MPS7 323 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
CLIP2-204ENST00000474962 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
CLIP2-204ENST00000474962 WASHC4Q2M389 1173 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 KSR2Q6VAB6 950 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 CWC25Q9NXE8 425 aaPredicted RBP15.17■□□□□ 0.02
CLIP2-204ENST00000474962 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
CLIP2-204ENST00000474962 E9PSI1 815 aa15.16■□□□□ 0.02
CLIP2-204ENST00000474962 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
CLIP2-204ENST00000474962 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
CLIP2-204ENST00000474962 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
CLIP2-204ENST00000474962 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
CLIP2-204ENST00000474962 CIAPIN1Q6FI81 312 aa15.16■□□□□ 0.02
CLIP2-204ENST00000474962 USP50Q70EL3 339 aaPredicted RBP15.16■□□□□ 0.02
CLIP2-204ENST00000474962 GPR101Q96P66 508 aaPredicted RBP15.16■□□□□ 0.02
CLIP2-204ENST00000474962 KCNQ5Q9NR82 932 aa15.16■□□□□ 0.02
CLIP2-204ENST00000474962 PDE8AO60658 829 aa15.15■□□□□ 0.02
CLIP2-204ENST00000474962 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
CLIP2-204ENST00000474962 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
CLIP2-204ENST00000474962 TNIP1Q15025 636 aa15.15■□□□□ 0.02
CLIP2-204ENST00000474962 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
CLIP2-204ENST00000474962 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
CLIP2-204ENST00000474962 COL4A1P02462 1669 aa15.15■□□□□ 0.02
CLIP2-204ENST00000474962 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
CLIP2-204ENST00000474962 SHTN1A0MZ66 631 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 TRAF5O00463 557 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 VEGFBP49765 207 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 HIRAP54198 1017 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-204ENST00000474962 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 CWF19L2Q2TBE0 894 aaKnown RBP15.14■□□□□ 0.01
CLIP2-204ENST00000474962 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 DBNDD1Q9H9R9 158 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms